Podarcis raffonei (Aeolian wall lizard): 128419805
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Entry
128419805 CDS
T09310
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128419805 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128419805 (EXOSC10)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
128419805 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
128419805
NCBI-ProteinID:
XP_053256920
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All DBs
Position
8:complement(76342532..76371789)
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AA seq
893 aa
AA seq
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MAAKERGGGGSENNAEPPGAESDTAADAVLPGFKDADSFVKHALGTVVSATKASGGLPQP
GDEYDFYRSFPGFQTFCEMQGDRLLHCMSRVMQYHGCRSHLRDRNKVTELEDKFDMLVDA
NDAILERVGMLLDEAAGVNKNQQPILPSGLQPPKTIVSSWNRKQTGEANKRTKSETFRLL
HAKNIVRPQLKFREKVDNSNTPFVPKLFVKPNALKPLPEVLLKSRRERKERPEDLDVPAA
LADFLYQQRTQQTEQDMFAHPYQYELAHFSPPAELLEKPQVQMFRPLEETPCHFISTLDE
LVELNEKLVGCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDLYILNETF
TDLAVVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCKVDAN
KQYQLADWRIRPLPEEMLNYARDDTHYLLYIYDRVREELWEKANGQPTQLQVVWQRSKDI
CLKKYVKPIFTEDSYLELYRKQKKHLNSQQLAAFRLLFAWRDKMGRQEDESTGYVLPNHM
LLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLFIQQAREMPLLKSEIAVGVKKRGPL
RNTEKPENHLFGPHDSSHMPQDEKPNHMDPAPVLSRECTRLFSEAEEEMERSDESPSLSC
LLLRASIDIFNETEASEEEDESLTVTQRKARQIMESFENPFRMYLPADQNPAHISQLAKF
DPSSKIYEISNRWKLLSQAQLQAGTKKESAKKKIQQTAAHEVPKKESKGKVENAVSVRQL
VAQEQAGHKRERVESDPGTETPRAEKKKPKASPQPEEQEATPKPFTPFDYSKSDLKVFAG
SSRPKPSTQFDPSKRAGKKFPGAGRVQQPAGTKSMSYMAGKSNRGFRHNWPKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaaggagcgcggcggcggcggctcagaaaacaacgccgagccgccgggggca
gagagcgacacggcagcggacgccgtgctgcctgggttcaaagacgccgattccttcgta
aagcatgcccttggcacggtggtgtcagccaccaaggcttctggcggcctccctcagccc
ggagacgaatacgatttctatcgcagttttcctggtttccagaccttctgtgaaatgcaa
ggggatcggttgctgcactgcatgagcagagtgatgcagtaccatggctgccgcagccac
ctccgggaccggaacaaggttacggaactggaagacaagtttgacatgctggtcgatgcc
aatgatgccatcctagaaagagtgggcatgctattggatgaagcagcaggtgtcaacaag
aaccagcagcctatcctcccctcaggcttgcagcctcctaagaccattgtctccagctgg
aaccgcaagcagactggggaagccaacaagcgaacaaagtcagaaaccttccgcctgctg
catgccaagaacatcgtccgccctcagctcaagttccgtgagaaggtggacaactccaac
acccccttcgtcccaaagctctttgttaagcccaacgctctgaagccactgccagaagtg
ctcttaaaaagcaggcgggaacggaaggagcgcccggaggatttggatgtgccggctgcc
ttggccgacttcctatatcagcagagaacccaacagactgagcaggacatgtttgctcac
ccttaccagtacgaactggcgcatttttcaccaccagctgaacttcttgaaaagccacaa
gtccagatgttcaggcccctggaggagacaccctgccacttcatctccaccttggatgag
ctggtggagttgaacgagaagctggtgggctgcaaagagttcgccctggacttggagcac
cattcctaccggagtttcctgggcttgacatgccttatgcagatttccacccggacagaa
gatttcatcatcgacacattggagctgcggagtgacttgtacatcttgaacgagaccttc
acagaccttgcagtggtcaaggtcctgcatggggccgactcggacgtggagtggctccag
cgagacttcggcctctatttggtgaacgtcttcgacacccaccaggcggctcggctcctc
aatcttggccggcactccctggaccatttgctcaagctctactgcaaggtggatgccaac
aaacagtaccagctggcggactggaggatacgacccctcccagaagagatgctcaattac
gcccgcgacgacacgcattacttgctgtacatctacgaccgggtcagggaggagctttgg
gagaaggccaatgggcagcctactcagctccaagtggtgtggcagcggagcaaggacatc
tgcttgaagaaatacgtcaagcccatcttcactgaagactcgtacctggagctctaccgg
aagcagaagaagcacctcaacagccagcagttggcggccttccggctcctctttgcctgg
agggacaagatgggtcggcaggaagatgagagcacggggtacgtgctgccgaaccatatg
ctgctcaagatagcggaggagctgcccaaggagccccagggcatcatcgcctgctgcaac
ccagttcctcccctcgttcgccagcagatcaacgaaatgcacctcttcatccagcaggcc
agagagatgccactgttgaagtctgaaattgcagttggagtgaaaaagagaggacctctt
cgaaacacagagaagccggagaatcatttgtttggacctcacgacagctcgcacatgcct
caggacgagaagccgaaccacatggatccagcacctgtgctgagccgggagtgcacgcgt
ctcttttcagaagcagaggaggagatggaaaggtcggacgagtcaccaagtctgtcctgc
ctcctgctgagagccagcattgacatctttaatgagacggaagcaagtgaggaagaggat
gagagtttgacagtcactcagcggaaagcccgccagatcatggaatccttcgaaaaccca
ttccgaatgtatttgccagcggaccagaaccctgctcatatctcccagttggcaaagttt
gacccgtcatcaaaaatctacgagatcagtaatcggtggaagctcctaagccaggcccag
cttcaagcagggacaaagaaagaatctgctaagaagaagatccagcagacagcggctcat
gaagtccccaagaaggaaagcaaaggcaaagtggaaaacgcagtctctgtccgccagctg
gttgcgcaggaacaagcaggccacaagcgggagagagtggaaagtgatccgggtaccgag
accccccgggccgagaagaagaagcccaaagcttccccgcagccggaagaacaagaggcc
actccaaagcccttcaccccctttgattacagcaaatccgacctcaaagtgtttgccgga
agcagcaggcctaaaccctcaacacagtttgatccctccaagcgagctggcaagaagttt
cccggagccggaagagtccagcaaccagccggaacgaaaagcatgtcgtacatggctggg
aaatccaacagaggcttcaggcataactggccgaaaagatag
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