Podarcis raffonei (Aeolian wall lizard): 128420027
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Entry
128420027 CDS
T09310
Symbol
TSR1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
praf03009
]
128420027 (TSR1)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
128420027 (TSR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
128420027
NCBI-ProteinID:
XP_053257368
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Position
8:complement(88270542..88284768)
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AA seq
814 aa
AA seq
DB search
MARKSGGGGAHRAGALKQQNKPHKSGRHSGSSAKKQGGRVPAKTLSQQRHRNLAKLDRKH
RAWQLRRQCREMVLEEKRNLGRKDGPPHLVVVVPLHAGIAIPRALSLFQSNAASTVCQTK
MGPPGFGLLCHQSRLRWRFVVADTGNLHAVLDLAKVADTLLFVLDPHEGWDAAGDYCLSC
IFAQGLPSYGLAVQGLSDQPLKKQIDCRKKLNKAIEKRFPEDRLFPLDTEQESALLLQHL
ASQKQRHLAFRDRRAHLLATAATFVPSTDSALVGTLKVSGYVRGRSLNVNSLVHIVGHGD
FQMSQVDASPEPFALNSRTAKIHPRSMGDQDDLVRREEEMEEDVKVLSKAEASKQESLQS
EVTPDPMDGEQTWPTEEELKEAEESLAQRKKMTKRVPKGTSAYQAAWILDNNDELESGSE
EDDEEEDKEENMVEEPISQDGSGSEEEEEEEEEEDEEATEEEEGPDMTLLDDEKMEDNEA
ILEKYRQERQEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQF
QDFSRTRKHVFRQLEKEESSGAEVGCYVTLHICSVPVSVMESFRQQVPLLLFTLLPYEQK
MSVLNLLVRRQPGDSEPVRSKEEVIVHCGFRRFRASPLYSQHSSADKHKLEQFLRADTAT
VATIYGPITFPPASVLLFRQKSNGAHSLLATGSLLSVDPDRLVIKRVVLSGHPFKILSKM
AVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCQFDGQLKSQDTVLMTLY
KRVFPRWTYDPHVPEPPRESLSSLLPGQEEEEMD
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagagcggaggcggcggggcccaccgggccggggccctgaagcagcagaac
aagccgcacaagagcgggaggcacagcgggagcagcgcgaagaagcagggcggccgggtc
cctgctaagacactcagccagcagcggcaccgcaatttggccaaattggaccgcaagcac
cgggcctggcagctccgccggcagtgcagggagatggtgttggaagaaaagcggaacttg
ggtcgcaaggatgggccaccccacttggtggtggtagtcccgctgcatgctggcatcgct
atcccaagagccttgagcctgtttcagagcaatgcagcttctactgtgtgccaaaccaag
atgggcccaccagggtttggcctgctgtgccaccaatccagactccggtggcgctttgtg
gtggctgacacagggaacctccatgctgtgctggacctggccaaggttgcagacaccctc
ctttttgtgctggatcctcacgagggctgggatgccgctggagactactgcctttcctgc
atctttgcacagggcctccccagctatggccttgctgttcaaggtctttctgaccagccg
ctaaagaagcagattgactgtcgcaagaagctgaacaaagccattgagaagaggttccct
gaagacaggctctttcccctcgacacagagcaggagtccgccctgctgctgcagcacctg
gccagccagaagcagcggcacctggccttccgagaccggagggctcacctgctggccact
gccgccactttcgtgcccagcacagacagtgccttggtggggaccctgaaggtgtctggc
tacgtcaggggacggagcctgaacgtgaacagcttggtgcatatcgtgggacacggggac
ttccagatgagtcaggtggatgcctccccagagccctttgctctgaactccagaactgca
aaaatacacccaaggagcatgggggaccaggatgaccttgtcaggagagaagaggagatg
gaggaagacgtgaaggtgctcagcaaggctgaagccagcaagcaagagtctctgcagtca
gaagtgacccctgaccccatggatggagagcagacctggcccaccgaggaggagctgaag
gaggctgaggagtccctggcacagaggaagaagatgaccaagagggtccccaaaggcaca
tctgcctaccaggctgcctggatcctggacaacaatgacgaattggagagtggcagcgag
gaggacgatgaggaggaagacaaggaagagaatatggtggaagagcccatctcccaggat
gggagtggcagtgaagaggaggaggaggaggaggaggaggaggatgaagaggccacagag
gaagaggagggtccagacatgaccctcttggacgatgagaagatggaggacaacgaggca
attctggagaagtacaggcaggagcggcaggaggagatgtttccagatgaggtggacaca
ccacgagatgtggcggcccggatccggttccaaaagtacagaggactgaaaagtttccgg
acctctccatgggaccccaaagagaacctgcccagggactatgcccggatcttccagttc
caggatttctcccggacgaggaaacacgtcttccggcaactggagaaggaggagagcagt
ggagctgaggtcggctgttatgtcacgctgcacatctgcagtgtccccgtctcggtcatg
gagagtttccggcagcaggtgcctctgttgctcttcacgctgcttccttatgaacaaaag
atgtctgtgctcaacctcctggtgagacgccagccgggtgacagcgagcccgtccggtct
aaggaggaggtgattgtccattgcggcttccgtcgcttccgagcctccccgctctactcc
cagcacagttcagctgacaagcacaagctagagcagtttctgcgggcagacaccgccacg
gttgccaccatctacggccccatcactttcccacctgcttctgtgctgctgttcagacag
aagagcaatggagctcacagcctcctggccacaggctccctgctcagtgtcgaccctgac
cggctggtgatcaagcgggtggtgctcagtggccaccctttcaagatcctcagcaagatg
gcagttgtgcgctacatgttcttcaacagagaggatgtattgtggttcaagccagtggag
ctccggaccaagtgggggcgccgggggcacatcaaggagcctctgggtacccatggccac
atgaaatgtcagtttgatgggcagctgaagtcccaggacacagtgctgatgaccctctac
aagcgtgtctttcccagatggacatacgatccccacgtgccagagccaccgcgggagagt
ttgagcagcctcctgcctggccaggaggaagaggaaatggactag
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