Podarcis raffonei (Aeolian wall lizard): 128420043
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Entry
128420043 CDS
T09310
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128420043 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128420043 (POLB)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128420043 (POLB)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
128420043 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128420043 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH_2
Cdd1
NUCB1_N
Motif
Other DBs
NCBI-GeneID:
128420043
NCBI-ProteinID:
XP_053257413
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All DBs
Position
8:complement(88912921..88928603)
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AA seq
335 aa
AA seq
DB search
MSKRKAPQENPNEGITDFLSELANYERNVNRAIHKYNAYRKAASVISKYPSKIKSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVSGIGPAAARKFVDEGIK
TLEDLRKNEHKLNHHQRIGLKYFEDFEKRIPRKEMLEMQEIVLSEVKKVDPTYIATVCGS
FRRGAESSGDMDILLTHPNFTSESSKQPKLLHQVVEQLENIHFITDTLSKGDTKFMGVCQ
LPSKDEETAYPYRRIDIRLIPRDQYYCGVLYFTGSDIFNKNMRTHALEMGFTLNEYTIRP
LGITGVAGEPLLVNSEKDIFDYIQWKYREPKERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaggcgccgcaggagaaccccaacgagggcatcaccgacttcctgagc
gaactggccaactatgagaggaatgtgaacagagccatccacaagtacaatgcttacagg
aaggcagcctctgtgatatcgaaatatccaagcaagatcaaaagtggagctgaagcaaag
aagctggatggagttggagctaaaattgcagaaaagattgatgaatttttatctactgga
aaactacgaaagctggaaaagatccgacaggatgatacgagctcgtctatcaatttcctg
accagagtcagcggtatagggcctgcggctgccaggaagtttgtggatgaaggaattaaa
actctggaagatctaagaaaaaatgagcacaaactgaaccatcatcagcgaattggattg
aagtactttgaagactttgagaaaagaattcctcggaaagagatgttagagatgcaggaa
atcgttttgagcgaggtaaagaaagtggaccccacgtatattgctacagtgtgtggcagt
ttccgtcgaggtgcagaatcaagtggggatatggatattcttttgacccatccaaacttc
acttcagaatcctccaaacagccaaagcttttgcatcaagtggtcgagcaactggaaaac
atccacttcattacagatacgctttcgaagggagacaccaagttcatgggagtgtgtcag
ctcccaagcaaagatgaggaaactgcttacccttataggaggattgatatcaggttgatt
cccagggatcagtattactgtggagttctgtacttcactggaagcgacatattcaataag
aacatgagaacccatgctctggaaatgggcttcaccctcaatgaatacacaatccggccc
ttggggatcaccggagttgctggggaacccctccttgtcaacagtgagaaggacatcttt
gactacatccagtggaagtatcgcgagccaaaggaacggagtgaataa
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