Podarcis raffonei (Aeolian wall lizard): 128420120
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Entry
128420120 CDS
T09310
Symbol
PLAT
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128420120 (PLAT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128420120 (PLAT)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
praf00536
]
128420120 (PLAT)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
128420120 (PLAT)
Peptidases and inhibitors [BR:
praf01002
]
Serine peptidases
Family S1: chymotrypsin family
128420120 (PLAT)
Glycosaminoglycan binding proteins [BR:
praf00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
128420120 (PLAT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
fn1
DUF1986
Trypsin_2
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128420120
NCBI-ProteinID:
XP_053257564
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Position
8:91767857..91788703
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AA seq
552 aa
AA seq
DB search
MRLGQGLSPFLLLLGGFATIQCQEFSWYAALGARSKVVCKDPVTQEIYQFRDSWLRQREK
ELEYCRCAINSIICHIVPGTACSRRQQCFNEGRCKQALYSSNFFICLCRPGYSGKRCEID
TKAKCYEGAGEGYMGTWNTTVSGAKCLNWKLNSLRNKRYNAYRADAARLGLGNHNYCRNP
DSDTMPWCFVYKGNKYSFEFCSLPPCANKSHTCISGRGNNYRGPHNRTESGAACLRWDSQ
FLTGLVFNSRREDAEQLGLTSHNFCRNPDNSTQPWCHVLRGGKRKWEYCNVPACSTCGTR
KYRQSQFRIKGGLYSYIQSHPWQAAIFVRIQGVEAYLCGGVLIHSCWVLSAAHCFVERFD
TSRLKVVLGRTSRRNPEWSEQTFSVEKYVVHKSFVQSTFDNDIALLKLKSLYNECAMETD
SVRPVCLPEPGLKLPDWTECEISGYGKHEEFSAFFSERLKEGHVRLYPDSQCTPKLLSNR
TVTENMLCAGDTREIDDACKGDSGGPLVCLNNGQMNLLGIISWGVGCGKKGIPGVYTKVV
HYLSWIQENMKP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgggacaaggactctccccatttctcctgctgctgggaggatttgccacaatt
cagtgccaggaattttcttggtatgctgcactaggagctcggtcaaaggttgtatgcaaa
gacccagtaacacaagagatctaccagttcagggacagctggctacgccaaagagaaaaa
gaacttgaatattgtcggtgtgcgatcaacagcatcatttgtcatatcgtgccaggcaca
gcctgcagcaggaggcaacagtgcttcaatgagggccgctgcaagcaagcattatactct
tctaacttcttcatctgcttatgccgcccaggctactccgggaagcgctgtgagattgat
accaaagccaagtgttacgagggcgctggagagggctacatggggacatggaacacaact
gtgagtggagccaagtgcttgaactggaagctcaattccttgaggaataagcggtacaat
gcgtaccgggcagatgccgctaggttgggccttggaaaccacaactattgcagaaacccc
gattccgacaccatgccctggtgctttgtctacaaaggaaacaagtacagctttgagttc
tgcagcctccctccctgcgccaacaaaagccacacttgcatttctggaagaggcaacaac
tatcgaggtccccacaaccgcacggaatcaggtgctgcttgcttgaggtgggattcccag
ttccttactgggctggtcttcaattcccgtagggaggatgcagagcagctcggtctcact
agccacaacttctgcaggaatcctgataatagcacccagccttggtgccacgtgctcagg
ggtggcaagaggaaatgggaatactgcaatgtgccggcttgctccacgtgtggaacgaga
aagtaccgtcagtctcagtttcggatcaaaggaggcctctactcgtacatccagtcccac
ccgtggcaggcagccatctttgtcaggatacaaggagtggaggcctacctctgtggtggg
gtcctgatccattcctgttgggtcctctcagctgcccactgctttgtggaaaggtttgac
accagtcgtctcaaggttgtgttgggcaggacttcccgcagaaacccggaatggtctgaa
cagacattctcagtggagaaatatgttgtacataaaagctttgtgcaaagcacctttgac
aacgatattgcacttctgaagctgaagtccttgtacaatgagtgtgcaatggaaacagat
tccgttcgtcctgtctgcctcccagagcctgggctgaagctgcctgactggacagaatgt
gagatctcaggctacggcaagcatgaagaattttctgctttcttctcggagcgtctgaag
gaaggacatgtgaggctctatccagacagccaatgcacacccaagctcctttcaaacagg
acggtcactgagaacatgctgtgtgcaggagacaccagagagattgacgatgcctgcaag
ggcgattctggtgggcctttggtttgtctgaacaatggccaaatgaacctgctggggatc
atcagctggggcgtgggttgtgggaagaaaggcattccgggtgtctacacaaaggtggtt
cactatctgagctggattcaggagaacatgaagccttaa
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