KEGG   Podarcis raffonei (Aeolian wall lizard): 128420187
Entry
128420187         CDS       T09310                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03020  RNA polymerase
praf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128420187 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128420187 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:praf03021]
    128420187 (POLR2I)
   03400 DNA repair and recombination proteins [BR:praf03400]
    128420187 (POLR2I)
Transcription machinery [BR:praf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     128420187 (POLR2I)
DNA repair and recombination proteins [BR:praf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128420187 (POLR2I)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 HVO_0758 TtuA_LIM_N Zn_ribbon_NrdR DZR
Other DBs
NCBI-GeneID: 128420187
NCBI-ProteinID: XP_053257699
LinkDB
Position
8:1438378..1448194
AA seq 125 aa
MESEGAYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggagtcggaaggggcctacgagccgggcttcgtggggatccgcttctgccaggaatgc
aacaacatgttgtaccctaaagaagacaaagagaacaggatccttctctatgcttgccgc
aactgcgactaccagcaggaggctgacaatagctgcatctacgtcaataagatcacgcat
gaagttgatgaactaacccagatcattgctgacgtttcccaggacccaactctgccccgc
acagaggaccacccttgccagaagtgcggccacaaggaagccgtgtttttccagtctcac
agcgcaagggctgaggatgccatgaggctgtattacgtctgcacggccccacactgcggt
caccgctggacggagtga

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