Podarcis raffonei (Aeolian wall lizard): 128420282
Help
Entry
128420282 CDS
T09310
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128420282 (NPAS1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128420282 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
128420282
NCBI-ProteinID:
XP_053257851
LinkDB
All DBs
Position
8:8461076..8565393
Genome browser
AA seq
844 aa
AA seq
DB search
MAALYGSEVKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELAK
MLPLPGAITSQLDKASIVRLTISYLKMRDFANHGDPPWSLRAEGPSPPGKAAGRRNMNTL
LTELFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSIFDYVHPG
DHPEVAEQLGLKPPSETSHSTRPKAPTLATATSSSGLTETSESDPASSHPAEGDVLDRSF
FIRLKSTLTKRGLHVKTSGYKVIHVTGRLRPRLPSFSHAHSLLGRVMGLVALAHTLPPST
LSEVRIECHMFVFRVNMDLQIVYCESRISDYMDLTPSELVGKSCYQFIHGEDVEGIRQSH
LDLLNKGQVVTQYYRWLQKNGGFVWVQSCATISVNVKNPTEKNMVWVNYILSKPECKNTV
LDIFQLPGIPARQTEAVEVGPEFKESSLAKESSHGRKLYSPSKPGSLAEGYPRSAAEAGA
RCRLAETDSSGPETSYREEELSDGGGGSDTEGPPSKHIKLEFQPESPSREAKEASSEESD
SGSESELGLLPQQRASLARKANGCKAGGRRSAGPGRPEFASVIQTQKSSVLKATPAPNIK
SEQPPGAKGAPWTCPAAHKGSPYTVNKALSLEKPSLRPASSHLYVSIPDSVLTPPEMESG
APKGPFGTSPRTVPAASSSADTLSPPLSGSPCEERATSTPFTPLLYPADMEVLQRFHAGN
VVVPLVHQLGGPHAGTSGSQGLYATSTIRYAPADMTLGMQSNVLPPSHPINLMDIGGAEA
KTPRELMYHHLQRLNMVAPFGNSASLAQISGGAFAATDSLFSTLPFSMAGSGVHGASALE
RKED
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctgtacggcagcgaggtgaaatgcgtcagcgtggaatgggatttcctgcaa
ggcttattagtgaagaaccagccggtgccttgcctccaagccctgcgcaaggagaagtcc
cgaaacgctgcacgctctcgccggggcaaggagaactttgagttctacgaactggccaag
atgctgccgctgcccggagccatcaccagccagctggacaaggcctccatcgtccggctc
accatcagttacctcaagatgcgtgactttgccaaccacggagacccgccctggagcctg
cgggcagaagggccttccccgcctggcaaagctgctggccggaggaatatgaacaccctg
ctaacagagctctttgaacagcacttagggggccacattctacagtctctggatgggttt
gtgtttgcactgaaccaggagggaaaattcctttacatctccgagacggtgtctatttac
cttgggctctcgcaggtggagctgacggggagcagcatctttgattacgtccaccctgga
gaccaccctgaggtcgctgagcagctgggcctgaagcctccctcggagacgtctcactcg
acgcgcccaaaagcgcccaccctggccactgccacctcctcttctgggctgacggagacc
tctgaatctgatccagccagctcccatcctgctgagggcgacgttttggaccgctccttt
ttcatccgtctgaaatccaccctgaccaagagagggcttcacgtgaaaacttccggttac
aaggtgatccacgtcacgggccgcctccgcccccggctgccgtccttctcccacgcccac
tccctgctgggccgcgtgatggggctggtggcgctggcccacaccctgcccccttccacg
ctcagcgaggtgcgcatcgagtgccacatgtttgtcttccgggtcaacatggacttgcag
atcgtgtactgtgagagcaggatcagcgattatatggacttgaccccctcggagctcgtg
ggcaaaagctgctaccagttcattcacggcgaggatgtggagggaatccggcaaagtcac
ctggacttgttaaacaaggggcaggtggtgacccagtattaccgctggctgcagaagaac
gggggcttcgtgtgggtccagtcgtgcgccaccatctcggtcaatgtcaagaaccccacc
gagaagaacatggtctgggtgaactacatcctcagcaagccggagtgtaagaacaccgtg
ctggacatattccagctgcctgggatccctgcaagacagacggaggccgttgaggtgggg
ccagaattcaaagagagcagccttgccaaagagagcagccatggaaggaagctttactcc
cccagcaaacccggctccctagccgagggctacccccggagcgcggcagaggccggtgcc
cgatgccgcctggcagagaccgattccagcggcccggaaacgagctaccgggaggaggag
ctgtcagacggaggcggcgggagcgacaccgagggaccgcccagcaagcacatcaagctg
gagttccagccagagagcccctcgcgggaggcaaaggaagccagctccgaggagtcagac
agcggcagcgaatctgagctgggcctcctcccacagcagagggcgtccctggcgaggaaa
gccaacggctgcaaggccggggggcggaggagcgcagggcccggccgcccagagtttgcc
tccgtcatccagactcagaagagctccgttctgaaagccaccccagcccctaacattaaa
tctgagcagccccccggtgccaagggagccccctggacctgtcctgccgcccacaagggc
agcccttacactgtgaacaaagcacttagcttagagaagccctctctgcggcccgcctct
tctcacctgtacgtctccatcccggactctgtgctcaccccgcccgagatggagagcggc
gcccccaaagggcctttcggcacctctccccggaccgtcccggcggcctcctcttcggcg
gacactctctcgcccccgctctcgggctccccgtgcgaggagagggccacgtccacgccc
ttcacgccgctcctctaccccgccgacatggaggtgctgcagcggttccacgcaggcaac
gtggttgtgccgctggtgcaccagctgggcggcccgcatgccggcacatccggctcgcag
ggcctttacgccaccagcaccatccggtacgcccctgccgacatgacgctcggcatgcaa
agcaacgtgctgccgccttcccaccccatcaacctcatggacatcggtggcgccgaggcc
aagacgccccgggaacttatgtaccaccacctgcagcggttgaacatggttgcgcccttc
gggaactcggccagcttggcccagatttcagggggagcctttgccgcgacggactccttg
ttttccacgctgcccttctcgatggccggcagcggggtccacggtgcctcggctttggaa
cgcaaggaggactga
DBGET
integrated database retrieval system
