Podarcis raffonei (Aeolian wall lizard): 128420570
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Entry
128420570 CDS
T09310
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128420570 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
praf04090
]
128420570 (SIGLEC1)
04091 Lectins [BR:
praf04091
]
128420570 (SIGLEC1)
CD molecules [BR:
praf04090
]
Proteins
128420570 (SIGLEC1)
Lectins [BR:
praf04091
]
I-type lectins (Siglecs)
128420570 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
Ig_5
Izumo-Ig
Ig_CD22
C2-set_2
Ig_6
C1-set
V-set_CD47
Herpes_gI
Motif
Other DBs
NCBI-GeneID:
128420570
NCBI-ProteinID:
XP_053258172
LinkDB
All DBs
Position
9:78511805..78564927
Genome browser
AA seq
1735 aa
AA seq
DB search
MPLPFFLFAFSSYVAQAFGSWAVTTPERLWSVKDSCVVIPCTFSYPSDVAVQNGITAIWY
KDNAGQKALVYHSATPGSVEGRFQGRTELLGDPLQRNCTLLLRGVTTADAGKYTFRFEIS
EGNRWSDQKGVVLTVTDSVDIPTIASPDDLREGMEVSLSCSSPYTCPYDSISMRWLGYDT
MTSLVSKTLQLDTAASLRKQTLTTSLSWKDHNRELSCEVSVGEQVATGRITLNVKHPPKG
VKVSLNPSSKNIRVGDEASLTCTVDSSNPEVTAYRWFKDGVSCGSEPLKAISSAAREDYG
LYHCEAENSMGTGVAEGVTLYVFSAVLSTSPSSSVREGETVTLTCDVPGEDKQEIHYSWY
KNNIWIKEGSARILVFHEVSVGDTGYYSCKVQNDKGSETSQAIGLSVFYPPRAPSLSLFQ
ETQEGQLAIIYCTVDSNPQSALSLYRDKRLIATTSSHSAPSQRISISTTRNSLKLEIQKV
VPEDQGEYQCVASNAYGNATTARFFGAQTARVVASPSQELPEGERVTLTCMSTLGLGDGT
TYTWYKNAKWLQEGLESSLVFPALASGDAGTFHCVARNEKASSTSPALTLRVLYAPKQPA
LRSFLETQGGHLGVIQCTVDSEPASEITLRKGDTLIGSTTIAHSSADPRVSVIQSYNTLK
VTIKDVRLEDEGEYLCSAQNRYGQSTASMDFTAETARITISPFSEVREGEAVQLSCEVSS
DNTTSSNYTWYKDGLPLPEVHGDSLEFQQVSRGDSGNYRCQVENEKASKSSTAATLSVLY
PPGKPWASVFAETERGRVAIFQCSVDSNPPAQLVLYKGGEVVASSSSANSAASQRVSITA
TPNAMRVEMRNIEPQDEGSYNITATNTYGSSSRLVYFRVQTARVLASPSPELLEGEALTL
SCDVMGSAPKESTFSWYKNSKRLQESDASTLTFKAITSSDAGSYHCKAHMLDEASTSVSP
AISITVFYPPRKPQVTSFLQTQGRQVAVIHCSTQSEPQSQLAIYKGGELLASTINSGTVA
PNPRFGVSASYNSLRVEISHVVMEDEGEYFCFAGNVHGNASSSVTFIAETARIWISSPDV
LEGNAVNLTCAADSNTAGDPHYTWYKNNRWYAEDASNMLSIPHATVADAGSYYCTVKNQE
RVRNSSLGTLNVLYPPRNAWVKSFLETQKGMLAIIVCSVESNPGSVLSLLRGSEVLASSS
FQASRAPNHRLSAAASPNSLRLEIKDVSLDDEGMYECVASNGIGNTSASLDFTVATTRVV
IKPVSEVREGDRVSLVCEDRSSPSTAVYTWYKNSRWLSEGPAPSLIFQAVATSDVGSYSC
QVQNERGTRKSPPAALRVLYAPKKPSLTSFLETQSGSQAIIECTVESHPPSDVTLYRGGV
ILASSSSFGTLPTQRLVVHSAHNALKIEIKDLRLEDNGQYRCSAKNTYGETTASMRFNVE
NARVTIEPSPDVQEGAMANMTCVVVSQAVGEMNYTWYKNSKWLQRGPERSLLLVGVARDD
AGSYHCQAEGRTGTVTSALVILNVLYAPSTPAISAYLDNQNGKVGIIDCKVDSHPRSLLA
LYKGDQLLADTNRSHAAAGLRFAMFPSYNSLKVEIRDVTPEDSGRYVCQAGNPFGKTTST
VDFSAETLSDLHLFKILAGVFFALTCAALLCGLALGMQTYWTRINEECKRWKQQKNKKAE
AAAGPENREETVQLSEQNPGTPLAGRFCLSYRKLRAKTDIPPQEEPSEQSCTSAL
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcccttcttcctttttgcattctccagttatgtcgcccaagcctttggttcc
tgggctgtcacgacccccgaacgtttgtggagcgtcaaagactcctgcgtcgtcatcccg
tgcaccttcagctaccccagcgacgtcgctgtccaaaatggcatcacagccatttggtac
aaagataacgcagggcagaaggctttggtttaccactcagcaactcctggtagcgttgag
ggccggtttcaaggacgcacagagctgctgggagaccccctccagcgcaattgcaccttg
cttctgaggggtgtgacaaccgcagatgccggcaagtacaccttccggttcgaaatcagc
gaggggaaccgctggtccgatcaaaagggggttgttttaaccgtcaccgactcggtcgac
atccccaccattgcctccccggacgacctacgagaagggatggaggtgtccctcagctgc
tccagcccctacacctgtccctatgacagcatctccatgagatggcttggctacgacacg
atgacctcgcttgtgtccaagacactgcagctggacacagcagcatcactcaggaagcaa
accctgaccacttctttgtcctggaaggaccacaaccgggaactgagctgcgaggtgtct
gttggggagcaggtggccacgggaagaatcacactcaacgtgaaacatccccccaaaggc
gtaaaagtgtcgctcaatccctcctccaagaacatccgagtgggcgatgaggcatccctg
acatgcactgtggacagcagcaaccccgaagtcactgcctacaggtggttcaaagatggc
gtctcctgcggaagcgagccgcttaaagccatcagcagtgctgcccgtgaggattacggc
ctgtaccactgtgaggcagaaaactctatgggcactggcgtggctgaaggggtaaccctc
tatgttttctctgctgtgctgtccaccagcccttcttccagtgtcagggaaggggagacg
gtcacgctgacctgcgacgtccctggagaagacaagcaggagatccactacagctggtac
aagaataacatctggatcaaggaaggcagcgcccgcatcctggtcttccatgaggtttcg
gtgggagacactggctattactcctgcaaggtgcagaatgacaaagggagtgagacatcc
caagctattggcctgagtgtcttctaccctccaagggccccctccctctccttgttccag
gagacccaggaagggcagttggccataatctactgcaccgtcgacagcaacccccagtct
gccctgagcctttaccgggacaagcggctgatcgcgaccaccagctcacactcggctccc
agccagcggatcagcatcagcaccacacgcaactctttgaagctggaaatccagaaggtc
gttccagaagaccagggcgagtaccagtgtgtggcctccaacgcgtacgggaacgccacc
actgcgagattcttcggtgctcaaactgctagggtggtggccagcccttcccaagagtta
cccgaaggcgagcgagtcaccctgacctgcatgtccaccttggggctgggagatggaacc
acgtacacgtggtataagaatgccaagtggctgcaggaggggctggagagctccctggtc
tttccggcgttggccagcggtgacgcaggaacgttccactgcgttgctcggaacgagaaa
gccagcagcacatcgccagccctcaccctgcgcgtcttgtatgcccccaagcagccggcg
ctgaggtccttcctggaaacccaaggaggacacctcggtgtcatccagtgcacagttgac
agcgaaccagcctccgagataactctgcgcaagggtgacacgctcatcgggtccaccacc
attgcccactcctccgccgacccaagagtgagcgtgatccagtcatacaacacactgaag
gtgaccatcaaggacgtgaggctggaagacgaaggagagtacctgtgttctgctcagaac
cgctatggacaatccacagcctccatggacttcacagcagaaactgcaagaatcaccatc
tccccgttctcagaggtgcgtgaaggtgaggcggtccagctgtcctgtgaggtgagcagt
gataacaccacctcaagcaactacacctggtacaaggatggtctccctcttcctgaggtt
catggggattccctggagttccagcaagtgtccagaggcgattcgggaaactatcgctgc
caagtggagaacgagaaagccagcaagagctccaccgccgccaccctgtctgtgctgtac
cctcctgggaagccttgggcgtcagtctttgcggagacggaaagaggtcgggtcgccatc
ttccagtgttcagtggacagcaaccctccagcccaactggtcctgtataaagggggtgaa
gtcgtggcttctagcagctcagcgaacagcgcagcctcccagagggtcagcatcacggcc
actcccaacgccatgcgggtggagatgagaaacatcgagccacaggacgaaggcagctac
aacatcacagccaccaacacctacggttcttcctccaggctggtgtacttccgtgtgcag
actgcccgagttctggcttcgccatcccccgagttgctggaaggagaggcgctcaccctg
agctgtgacgtgatggggtctgctcccaaggagtccaccttctcctggtacaaaaacagc
aagcgcctccaagagagcgatgccagcacactcaccttcaaggccatcaccagcagcgac
gctggatcctaccactgcaaagcccacatgctggatgaggccagcaccagcgtctctcca
gccatcagcataactgtcttttatccgcctcggaaacctcaggtgacctccttccttcag
acacagggcaggcaagtggctgtcattcactgcagcacccagagcgagccccagtcccag
ctggccatctacaagggcggtgagctcctggcctccaccatcaactctggcacggtggca
cccaacccgcggtttggcgtatcagcctcgtacaacagcttgagagtggagatctctcat
gtggtgatggaggacgaaggagagtacttctgctttgctggcaatgtgcacggcaacgcc
agctcctcggtgacgttcatcgcagagactgcaagaatctggatttcttctccggatgtt
ctcgaagggaatgcagtgaacctcacctgtgcagctgacagcaatacagctggcgatccg
cactacacctggtataaaaacaacagatggtacgccgaagacgcatcaaatatgctgtca
attccccacgctacggtggctgatgctggctcctactactgcacagtgaagaaccaggag
agggttcggaactcctccttgggcactctgaacgtcctctatccccccaggaacgcttgg
gtgaagtctttcctggagacccagaaagggatgctggccatcattgtgtgctctgtcgaa
agcaaccccgggtctgtactctccctcctccgaggcagcgaagttctcgcatccagctct
ttccaagccagccgggcgccaaaccataggctgagcgccgctgcctctccaaactccttg
agactcgagatcaaagatgtcagcctggacgacgaagggatgtacgagtgcgtggccagc
aatggcatcggcaacaccagcgcctccttagacttcacagtggcgactacaagggttgtg
attaagccagtctcagaggtgcgtgaaggggatcgggtctctctcgtctgtgaagacaga
agctccccatcaacagctgtctacacctggtacaagaattccaggtggctgtctgagggc
ccggccccctccctcatcttccaggcggtggcaaccagtgacgtgggctcctactcctgc
caagttcagaatgagagggggaccaggaagtctccacctgctgctctgagggtgctctat
gctccaaagaagccctccctgacttccttcctggagactcagtccgggagccaggccatc
atcgagtgcacggttgagagccacccgccgtccgatgtcaccctgtacagggggggcgtg
atcttggcttccagcagcagttttgggactctccctacccagcggctcgttgtccactca
gcccacaacgccctgaaaattgagatcaaggatctccgcctcgaagacaacgggcagtac
cgatgctccgctaagaacacctatggagagaccaccgcttccatgcgcttcaatgtggag
aatgccagggtcacgattgagccgtctcccgatgtccaggaaggagcaatggccaacatg
acctgtgtggttgtcagccaggcggtgggagaaatgaactacacgtggtacaagaacagc
aagtggctccagcgtggtccagagcggtccctcctcctggtgggcgtggccagggacgat
gctggctcataccactgccaggcagaggggaggacgggaaccgtgacctctgccttggtc
atcttgaacgtgctttatgcacccagcacccctgccatcagtgcctacctggacaaccaa
aacgggaaggtgggcatcatcgactgcaaggtggacagccatccccgctccctgctggcc
ttgtacaaaggagatcagctcctggctgacaccaaccgctcccatgccgcagccggcctg
cgcttcgccatgttcccctcctacaacagcctgaaggtggagatccgagacgtcacacca
gaggattcagggcgttatgtctgccaggccggcaacccatttggaaagaccactagcacc
gttgacttcagtgcggaaacgctctcagacctccacttattcaagatcctggctggggta
ttctttgccttgacttgtgcagctctgctttgtggcttggcgcttgggatgcaaacatat
tggacccggatcaatgaagagtgcaaaaggtggaagcagcagaaaaacaagaaggcggaa
gcagcagcagggccagaaaacagagaagagactgtccagctgagtgagcagaacccagga
acgcctctggccggacggttctgcctctcctacaggaagctacgagcaaagaccgacatt
cctccacaggaagaaccctctgaacagagctgcacaagcgccttgtga
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