Podarcis raffonei (Aeolian wall lizard): 128420737
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Entry
128420737 CDS
T09310
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128420737 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128420737 (XRCC5)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
128420737 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
128420737
NCBI-ProteinID:
XP_053258569
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Position
1:complement(87692389..87731658)
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AA seq
731 aa
AA seq
DB search
MSRGAKAAVVLCMDVGFSMSNSGPGEDSPFEQAKKVMTMFVQRQVFAESKDEIALVLFGT
EDTANSLASGDQYQHITVHRHLMMPDFDLLEDIQNMVQPGSEHGDILDALVVCMDLLQKE
TIGKKYDKRHIEVFTDLSSPFSEDQLDVIIANMKNTGISLQFFLPFPANDEDGSGDAGNG
LHSSRDQNPFPRKGLSGQQKEGLQMVRKLMFSLAKEEGLEDIYTFRESLERLSVFKKVER
RPMAWPCQLTIGSQLSIRIVAYKAFTEEKVKKTWTVVDAKTLKREDVQKETVYCLNDDDE
TEVQKEDVIQGFRYGSDIVPFSKVDEEQMKYKTDGKCFAVLGFTRSSQVQRHRYMGYQVL
KVFPAKDDEAAAVALSALIHALDELDMVAIVRYVYDRRSHPQVGVAFPLIKNEYECLAYV
QLPYMEDLRQYMFSSLKNNKKFTPSEDQLCAVDSLIDSMSLVYEDESEGTSQDIFKTSKF
PNPQFQRLYQCLQHKAFHPDAPLPPIEKHISDMLGTPQEVTEKCQAPLEKLKALFPLKEA
DKIKEQKTAQHIFKDNNEDGPNAKKAKTEDDEGDFRIANLAEGNVTVVGSVNPAENFKVL
VRQKNVDFKDVSQQLINHIHQFLENKGHLYYMKSIDCIKVFREEAIKLSEVQCFNDFLQA
LKKRVEDKNLTDFWETVIQDRISLITKEETEGSSLTAEDAQKFLAPKEKLMETSPVADDD
GGDVDDLLDMI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggggcgaaggcagcagtggtcctgtgtatggatgtcggcttttccatgagc
aattctggtcctggagaagactctccttttgaacaagccaaaaaagtgatgacaatgttt
gtgcagcgacaggtgtttgctgagagtaaagatgaaatcgccttggttttatttggcaca
gaggacactgcaaatagccttgccagcggggaccaatatcagcatatcactgtgcacaga
cacctgatgatgccggattttgatttgctggaagacatacaaaatatggttcagcctggc
tctgaacatggggacattcttgatgctcttgttgtttgcatggacttgctccaaaaggaa
acaattgggaaaaaatatgacaaacggcacattgaagtttttacagacctcagtagtccc
ttcagtgaggatcaactggatgttatcattgctaacatgaagaatactggtatttcgctt
cagtttttcttgccatttccagcgaatgacgaagatggaagtggggacgcggggaatggt
ttgcattccagtagggaccaaaacccttttccaaggaaggggctatctgggcagcagaaa
gaaggccttcagatggtgagaaagcttatgttttccttagccaaagaagaaggcctggag
gacatttatactttcagagagagtctggagcgcctttcagtgtttaagaaagttgaacgg
agacctatggcttggccttgccagctcacaattggttctcaattgtctataaggattgtg
gcctacaaagcattcaccgaggaaaaagtgaaaaaaacctggacggttgtagatgccaag
acactaaaaagagaagatgtgcagaaagaaacagtttactgcttgaatgacgatgatgaa
acagaagttcagaaggaggacgttattcaaggattccgctatgggagcgatatagttcct
ttctctaaggtagacgaggaacagatgaaatacaagacggatgggaaatgttttgctgtc
ttggggttcacaagatcatctcaggtccagagacatcgttacatgggatatcaggttctg
aaagtcttcccagcaaaggatgatgaggctgcagccgtggctctttctgccctcattcat
gctttggatgagttggatatggtggccatagtgcgttatgtgtatgacagaagatcgcac
ccgcaagttggagtagcctttccgttaattaagaatgaatacgagtgtttggcctatgta
cagctaccgtatatggaagatctgaggcaatacatgttttcctccttaaaaaataataaa
aagtttacaccatcagaggatcagttgtgtgcagttgactctctgattgattccatgagt
ttggtttatgaagatgagagtgaagggaccagccaggatatatttaaaaccagcaaattc
cccaaccctcaatttcaaagattgtatcagtgcctacagcataaggctttccatcctgat
gcacctttgcctcctattgaaaaacacatctcagacatgttggggacaccacaagaagtg
actgagaaatgccaggctccccttgagaaattaaaagcgctttttcccttgaaggaagca
gataaaattaaagagcagaaaacagctcagcatatcttcaaagataataatgaagatggg
cccaatgctaaaaaggcaaaaacagaagatgatgaaggtgactttagaattgcaaacctt
gctgaaggcaatgtcactgtggttggaagtgttaatcctgcagaaaacttcaaagtgctg
gtgaggcagaaaaatgttgacttcaaggatgttagtcagcagctgataaaccacatccac
cagtttctggagaacaaggggcacctgtattatatgaagagcatcgactgcataaaagtt
ttccgagaggaagctattaagctgtcagaggtgcagtgctttaatgattttctgcaggcc
ctgaaaaagagagtggaagataaaaatttaactgatttctgggagactgtaatacaagat
agaatttccttgatcaccaaagaagaaactgaaggaagctctctgacagctgaagatgcc
caaaagttcttggctcccaaagaaaagctcatggaaacttcaccagtggcagatgatgac
ggcggcgatgttgatgatctgctggacatgatttaa
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