Podarcis raffonei (Aeolian wall lizard): 128420998
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Entry
128420998 CDS
T09310
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128420998 (LRBA)
Membrane trafficking [BR:
praf04131
]
Endosome - Lysosome transport
Others
Others
128420998 (LRBA)
Endosome - Golgi transport
128420998 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128420998 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
SUKH_6
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
128420998
NCBI-ProteinID:
XP_053259114
LinkDB
All DBs
Position
9:42022900..42384519
Genome browser
AA seq
2847 aa
AA seq
DB search
MASEDKQVASPRPTGDDGGGGGGTGGGKEGNAAEMESKLQPLNPGIPIRGIRMKFAVLTG
LVEVGEVSNRDIVETVFNLLVGGHFDLEMNFIIQDGESITCMVDLLDKCDVTCQAEVWSM
FTAILKKSIRNLQICTEVGLVEHVLQRIDKADNMIADLLVDMLGVLASYSVTVRELKLYF
SKLQGDKGKWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTF
HTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLVVTSIKSKGKGFQHCVKFD
FKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADA
NRVFCGQMTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKGESDLFLADHHKLLLYDGKL
SNCIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVITHSIQSAMHSIGGV
QVLFPLFAQLDYRQYSLDQPDTTVCSILLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLE
KSSKAHISRAVLELCLAFAKYLSNLHNGVPLLKQLCDHILLNPAIWIHTPAKVQLILYTY
LSTEFIGTANIYNAIRRVGTVLLAMHTLKYYYWVVNPQDRSGIIPKGLDGPRPNQKEIFS
LRAFLLMFVKQLVMKDHGVKEDELQGILNYLLTMHEDDNLMDVLQLLVALMSEHPSSMIP
AFDQRNGLRVVYKLLASKSEGIRVQALKVLGYFLKHLAPKRKAEIMLGHGLFSLLAERLT
LQTSLITMTTYNVLFEILIEQICTQVIHKQHPDPDSTVKIQNPQVLKVIATLLRNSPQSP
ETLEVHRVFLSDMIKLFNSSRDNRRSLLQCSVWQEWMLSLCYFNPKNADEQKITEMVYAI
FRILLYHAVKYEWGGWRVWVDTLAITHSKVTFEIHKESLSQMFREYQEKGDEDSGAGPST
LIRSISGTSREAEVTGRQQHLETKEAGTSANDVGNGKVENSTLNAEGRPPDFEKQANSEM
NEEKQTEGENGWRTPDLSKAPCLELPLKAEAIKQDSEAASETTEANHEEETVAAIAQSPS
QNVEGDTLESPEILEKLTPEVEEEEEEDFVDLKEESSLPFTSEEYAPKLSKDHTLSESQV
APAVQQHTATLEEPVSVALEPKVADASVETGQGSDALPQTNASEISDTKAQPNADITEKA
DEHNTDNLQTKTTVDDMQPHISETVVVSDKKIAKLDVSSVASDTERLELKSSTSLEVNQP
LHSLPETSRQQDAASQGTGAASDGQRRDSRSTMFRIPEFRWSQMHQRLLTDLLFSIETDV
QMWRSHSAKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELE
NIEPTQGLSIEASVAFLQRLISLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAV
AVRNCLECQQQQALMKPSGENVKCQKTVQSLIAAGRSGAKSPVDIVTGGISPIRDIDRLL
QDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQDERRRPQSVQSL
KPATTDAENPPAATTAVAPLPAEELESVASVQRRDSGIEEEAHSGLDHSSEAATEAETQS
VIAGPDAISEVLCTLSSEVNKSQEGRSEVQTEMDTKTASSVQTAKNVNVKDILRSLVSAP
ADGATVDPAVLPPAFLGILGDSAAEQPVQFRSFDRSVVVAPKKSVAASTSTINLPTNAVS
VVSSLDSAQAPDAMGGSPGSGSSNSRLPSVPTVSSVPEDSASNMSITERLEHALEKAAPL
LREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNA
GLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESLSAQYSADKRE
DEKMCDHLIRAAKYRDHVTATQLIQKIINILMDKHGAWGNSAPSRPREFWRLDYWEDDLR
RRRRFVRNPLGSTHPEATLKTAIDHAPDEDVLVKGKQSIKSQALGNQNSESEILLEGDDD
TLSSIEEKELENLTGPVSLSTPAQLVAPCAVVKGTLSITASELYFEVDEEEPSFKKIDPK
ILAYTEGLHGKWLFSEIRSVFSRRYLLQNTALEIFMANRVAVMFNFPDPATVKKVVNCLP
RVGIGTSFGLPQTRRISMASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYNDLN
QYPVFPWVLTNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFADRHETWEDDQVPKFHY
GTHYSTASFTLTWLLRIEPFTTFFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELV
PEFYYLPEMFVNYNNYNLGVMDDGTVVSDVELPPWAKTPEDFVRINRLALESEFVSCQLH
QWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLNSITDPVLREAVEAQIRSFGQTPSQL
LIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLANPAV
ITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHKRQITDLLDQSIQV
HSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLMQVVFGHWDVVTCLSRSESYIGGNCY
ILSGSRDATLLLWYWNGKTNCIGDSPSGEFATPRAILTGHDYEITCASICAELGLVISGS
KEGPCLIHSMNGDLLRALEAPENCLKAKLIQASREGHCVIYYDNGHFCVFSVNGKLQATM
ETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVCDLKQLFAYPGCDAGIRSMALSYDQRCI
MTGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagacaaacaggttgcttctcctcggccaacaggtgatgatgggggaggg
ggaggtggtaccggaggaggaaaagaaggaaacgcggccgaaatggagagcaagctgcag
cctttgaatccaggaatccctattcgtggtatcaggatgaaatttgctgttctgacagga
cttgtggaagtcggagaagtatccaacagggatattgtggaaactgtgtttaatctgctt
gtaggaggtcactttgatctggaaatgaactttattatacaagatggagagagtattact
tgcatggtggacttgttggataaatgtgatgtcacttgccaggctgaggtatggagcatg
tttacagccatcttgaagaaaagtatacgaaatctccaaatttgcacagaagtgggtctt
gttgagcacgtgctccagaggattgataaagctgacaatatgattgcagatctcctagtt
gatatgctgggagtattagcaagctacagtgtgacagttcgggagttaaagctgtacttc
agcaaacttcagggagacaaaggaaaatggccaccacatgctggaaagctgttgtctgtg
ttaaagcacatgcctcagaagtatggtcctgatgccttcttcaattttccaggaaaaagt
gctgcagctattgccttacctcctatagccaaatggccctaccagaatggatttactttt
catacttggttaagaatggatcctgtaaataatatcaatgtagacaaggataagccttac
ttatattgttttcgaacaagcaaaggactcgggtattctgctcattttgttggaggctgt
ttggttgtgacctcaattaaatcaaaaggaaaaggcttccagcactgtgtgaaatttgat
ttcaagccacaaaagtggtacatggttactatagtgcatatctataatcgttggaagaac
agtgaactcagatgttatgtgaatggggaacttgcatcttatggagagataacatggttt
gtcaataccagtgacacatttgataaatgtttcctgggttcttcagaaacagcagatgcc
aatcgagtgttttgtggccagatgacagctgtctatcttttcagtgaggctctcaatgct
gctcagatttttgctatttatcagcttggtcttggatacaagggaacttttaaattcaag
ggagaaagcgacctcttccttgctgaccatcacaaactgttactgtatgacgggaaactt
tctaattgtattgcctttacgtacaatccaagggctacagatgcacagctctgcctagaa
tcatcacccaaggataacccttccatctttgtacattcaccacatgccctcatgctgcag
gatgtaaaagcagtcataacccattcaatccaaagtgcaatgcattcaattggaggagtg
caggtgctttttcctctgtttgcacagctggactataggcaatattcattggatcaacct
gacacaactgtttgttccattctgttggctttcatcatggagttgctgaagaactcaatt
gctatgcaagaacaaatgctttcttgtaagggcttccttgtaataggatacagtcttgaa
aagtcttccaaagcacacattagcagagctgttcttgaactttgtcttgcctttgctaag
tatctgagcaatttgcacaatggtgtgcccttgctgaagcaactgtgtgatcatattctc
cttaaccctgcaatatggattcatactccagccaaggttcagttgatcctgtacacttac
ttatctaccgaattcattggcacagccaatatatacaatgcaattcgacgagtaggaaca
gttctcctggctatgcacacattgaagtactactactgggtggtgaatcctcaagatcgc
agtggaattattccaaaaggtttagatggaccacgacccaatcagaaagaaattttttcc
ttgagagcctttttgctgatgttcgttaagcagttagtaatgaaggatcatggagtaaaa
gaagatgaactacagggcatcctcaactatctcctcaccatgcatgaggatgacaattta
atggatgtcctacagctacttgttgcccttatgtcagagcaccccagctctatgatccca
gcctttgatcagaggaatggattacgtgttgtctataaacttcttgcatcaaaaagtgaa
gggatccgggtacaagctctgaaagtgttggggtacttcttaaagcatctggcacccaag
agaaaagctgaaatcatgcttggacatggactgttctctctactggctgagaggctcacc
cttcaaacaagcttaataaccatgaccacatataatgtgctatttgagatacttattgag
cagatttgtactcaagtgatacataagcagcatcctgacccagattcaacagtgaaaata
caaaatcctcaggttctaaaggttattgcaaccttgctgcgtaactctccacagagtcca
gaaactctggaagtccatagagtcttcctctcagatatgataaagctttttaatagcagc
agagataataggaggagtttactacagtgctctgtgtggcaggaatggatgctttcactt
tgctatttcaacccaaaaaatgctgatgaacagaagataactgaaatggtgtatgccatt
tttcggattttactttaccatgcagtcaaatacgaatggggtggctggcgtgtttgggta
gatacgctagcaatcacacactcaaaggtaacttttgaaatacacaaggagagcctttct
caaatgttcagggaatatcaagaaaaaggagatgaagactctggtgctggtccatcaact
ctaattagaagtatctcaggaaccagcagggaggctgaagttacaggaaggcagcagcat
ctggaaacaaaagaagctggtacttctgccaatgatgttgggaatggtaaagtagaaaac
agtactctgaacgctgaaggtagaccacctgattttgaaaaacaagctaactcggaaatg
aacgaagaaaagcaaacagaaggagaaaatggttggagaactcctgatctaagtaaagca
ccttgcttggaacttcccctaaaggctgaagcaataaagcaagattcagaagctgcttct
gaaaccactgaagcaaatcatgaggaagagacagtagctgccattgcacaatccccttca
caaaatgttgaaggagacacacttgaaagcccagaaatattagaaaaactaacgccagaa
gtggaggaggaggaggaggaagattttgtcgatttaaaagaggagagcagcctacctttt
acctcagaggaatatgctcctaaactcagtaaagatcataccttgtcggaaagccaggta
gcaccagcagtacagcaacatactgctacattggaagaaccagtttcagttgctttagaa
cccaaagttgctgatgcatctgtggaaacaggacaagggtcagatgctttgccacaaacc
aatgcttctgaaattagtgatacgaaagctcaaccaaatgcagatattacagagaaggca
gatgaacacaatactgataaccttcaaaccaaaacaacggtagatgatatgcagccacat
atttcagaaacggtggtggtttcagacaagaaaatagcaaagcttgatgtttccagtgta
gcatcagatactgaaagattagagttaaagtccagcactagcctggaagtaaatcaacct
cttcattccctccctgagacatcaagacagcaagatgcagcaagccaaggcacaggagct
gcctcagatggacagagaagggactctaggtctaccatgtttcgcattcctgaattccga
tggtcacaaatgcatcaacgcttactcacagacctactgttttcaatagaaacagatgta
cagatgtggagaagccactctgccaagactgtgatggacttcgtcaatagcagtgataat
gtcatctttgtacataacacaattcatctcatctctcaagtgatggataatatgattatg
gcttgtggtggcatattacctttgctttctgctgctacatctgctacccatgaattggaa
aacattgagccaactcaaggactatccatagaagcttctgtagcattcctccaaagatta
atcagccttgtggatgtgttaatatttgcaagctcccttggatttacagaaattgagtcg
gagaaaaatatgtcatctggtggaattttacgacaatgtcttcggcttgtgtgtgctgtg
gcagtcagaaattgcttggaatgtcagcagcaacaggcactaatgaagcctagcggagaa
aatgttaagtgtcagaaaacagtacaaagcctgatagcagcaggaaggtctggagcaaag
agcccagttgatattgtgactggagggatttctccaataagggatattgacagactccta
caggatatggatattaaccgactgcgagcagtggtattcagagatatagaggatagcaaa
caggcacaattcttggctttggcagtagtatattttatctccgtcctcatggtatcaaaa
tatagagacatattggaacctcaggatgaacgtaggcggcctcagtctgttcagtcactc
aagcctgcaacaacagatgcagaaaacccacctgcagctactaccgccgtggctcctcta
cctgccgaggagttggaaagtgttgcgtctgtgcaaagaagagattcaggtattgaggag
gaagcacattccggattagaccacagttctgaagctgctacagaagcagaaacacaaagc
gtcattgcaggcccagatgcaatcagtgaagtactgtgtacgctttcttcagaagtcaat
aaatctcaagaaggcagaagtgaagtgcagactgaaatggacactaaaactgcatcctct
gtgcaaacggcaaaaaatgtcaatgtgaaagatatcctaagaagtttggtcagtgctcct
gcagatggggccacagttgacccggcagttcttccaccagcttttcttggaatccttggg
gatagtgctgccgaacagcctgtacagtttcgatcctttgacaggagtgttgtcgtggca
ccaaagaagtccgtggctgcctctacatccactataaatttgcccacaaatgctgtcagt
gtggtttcttctttggattctgcccaagctccagatgcaatgggaggttctcctggcagt
ggatcgtcaaattcaagattaccatctgttcctacagtttcttctgtgcctgaggattct
gcttcaaacatgagcattacagaaaggcttgagcatgctttggaaaaggctgccccactt
ctgagagagatatttgtggattttgctcctttcctgtcacgtactcttttgggtagccat
gggcaagagctactgatagaaggtacaagtttggtgtgcatgaaatctagtagttctgtt
gtggagctggtcatgctactttgttctcaggagtggcagaactcaatacagaagaatgct
ggtctagctttcattgagcttgtcaacgaaggaagattgctgagccaaacaatgaaggat
catctggtgagagttgcaaatgaagcagaatttatcttgagcagacaaagagctgaagat
attcacaggcatgctgaatttgagtcattgtcggcccagtattctgcagataagcgagag
gatgagaagatgtgtgatcatttgataagggcggccaagtatcgagatcatgtgacagca
actcagctaatacagaaaatcatcaacattctgatggataagcatggagcctggggcaat
tctgcaccaagtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcgg
cgccggcgacgatttgtgcgtaacccccttggatcgacacatcctgaagcgacgttaaaa
acagccatagaccatgctccagatgaagatgtacttgttaaaggaaagcagtccatcaag
agtcaggctttaggaaatcagaactctgagagcgaaattctcctggaaggcgacgatgat
accttgtcatccatcgaagagaaggaactggagaacttaactggtcctgttagtctgtct
acaccagctcagcttgtggccccttgtgcagtagtgaagggcacactttccatcaccgcc
tctgaactgtattttgaggtagatgaagaagagccgagttttaagaaaattgaccccaag
atacttgcttatacagaaggactccatgggaaatggctgttctcagagattcgatcagtc
ttttctcggcggtatctcttgcaaaacacagcactggaaatctttatggcaaacagagtt
gctgtcatgttcaactttccagatcctgctacagtaaagaaagtggttaattgtctacct
cgtgttgggattggtactagttttggattgccccaaactaggcgcatttctatggccagt
ccgcgtcagatctttaaagcatcaaatatgacccagcgatggcagcacagagaaatttca
aattttgaatatctcatgtttctaaacactatagcagggcgtacttacaatgatttaaac
cagtacccggtatttccttgggttctcactaactatgaatcagaagaactggaccttacg
cttccaagcaacttcagagatttgtcaaagcctattggggctctgaatcccaaaagagct
gcattctttgctgaccgccatgaaacatgggaagacgatcaagttccaaagtttcattat
ggcactcactattcaacagcaagttttacactcacctggttgttaagaattgaacctttt
acaacatttttcctaaacttgcaagggggcaaatttgatcatgcagatagaactttttca
tcaatttcaagggcatggcgcaatagtcaacgggacacctctgatatcaaggagctggtt
cctgaattttattatctccctgagatgtttgtcaactacaataattacaatcttggagtg
atggatgatggaacagtagtgtctgatgttgaacttccaccatgggccaaaaccccagaa
gactttgttcgcataaatagattggccttggagagcgaatttgtttcctgccagctccac
cagtggattgatctgatttttggctacaaacagcaagggcctgaggctgtcagatctcta
aatgtgttctactatttgacctatgaaggagctgtcaatctcaattcaataactgaccca
gtactgagagaggctgttgaagctcaaatccgaagttttgggcagactccttcccaactg
ctcatagagccacatcctccaagaagctctgccatgcaggtgtatctcctcctgcagagt
ccattgatgttcacagaccaagctcagcaagatgtcatcatggtcctcaaatttccatca
aactcccctgtaacacatgtagcagccaacacccagccaggtttggcaaatcctgctgtg
attaccgtcactgctaatcgactgtttgctgtgaataagtggcacaaccttcctgctcat
caaggtgccgtacaggaccagccataccagctgccagtggaaatcgatcctctcatagcc
agcaatacgggtatgcacaagagacaaattacggatctcctagatcaaagtattcaagtc
cattcccagtgttttgtcatcacttctgacaatcgctacatcctggtctgtggtttttgg
gacaaaagtttccgggtgtactctacagatacagggaaactgatgcaagtagtgtttgga
cactgggatgttgtcacctgtctttctcgctccgaatcctacattggaggaaactgttac
attctctcagggtctcgtgatgcaacattgctactgtggtactggaatggcaaaaccaat
tgcattggtgatagcccaagtggtgaatttgccactcctcgagcaatcttgacaggtcat
gactatgagattacctgcgcttcaatttgtgctgaactcggcctggtaataagtggttct
aaagaaggaccatgtctcatacattctatgaatggagatctactgagggcgttagaagca
cctgaaaactgtctgaaagcaaagcttatccaggcatcaagagagggtcactgtgtcata
tactatgacaatggtcacttctgcgtattcagtgtgaatgggaaactgcaagcgactatg
gaaactgatgataatataagggcaattcaactgagccgggatggacagtacctccttaca
ggaggcgacaatggggttgttatggtgtggcaagtgtgtgacctcaagcaactttttgcc
tatcctggttgtgatgctggaatccgatccatggctctttcctatgaccaaaggtgtata
atgacaggcatggcttctggcagcatagtgcttttctacaacgatttcaacaggtggcat
catgaataccaaactaggtactga
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integrated database retrieval system
