Podarcis raffonei (Aeolian wall lizard): 128421295
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Entry
128421295 CDS
T09310
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128421295 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
128421295 (LIMCH1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
CH
Motif
Other DBs
NCBI-GeneID:
128421295
NCBI-ProteinID:
XP_053259882
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All DBs
Position
9:22535483..22750531
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AA seq
1716 aa
AA seq
DB search
MHGAVPSPPIAAGDARRPLAFPARPPGESREPPEPRLPPCCGSGGAARLCRWPVRARGCW
RRRSLRGTRRSQLWLKRSSGSRLLNSIKPGLVKKINRLPTPIAGLDNIALFLRGCKELGL
KESQLFDPVDLQDNSSKATVRNLDCSRKLKNVLVTIYWLGKTANSSTGFSGATLNLREFE
GLLTQLRKETEDVESPKRSIRDSGYVDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQ
TPSPDVVLRGSSDGRESDSESDLPHRKLPDVKKDDMSARRTSYGEPKSVVPFNQYLPNKS
NQTAYIPAPLRKKKAEREEFRKSWSTATSPLGGERPFSKSHPETIEEEQTEVLAQSEEEC
SGCCVSTAIPSGKPVQADVSQGEPLRHSSTHSAKKAAGPRNPEKDPKELGKLRRIEQAGI
KIMPAVQRYGSSQLHMCKMDELIPDILLRKENPFMLSYQRKDSGSEDERDDRIPDLEKDD
FAIRRARLNQPKLTLPFNQYLLGSYANKDRGKVEEGKKQKKKQECSSGQKMSVTSARPMV
ICEDKPFPQSQKDDSKEKDQSKFPDVQRDDLAKRNTQASLSQVDLPCFARATITQADQDT
WDRLKVSGNSSDEELTNAPGSFLTSETAVEAAGRNRFASRKVRMSEKPSSPKQSEVMDAC
NSSLSDACADSQKQTPSSLSEWHESSEEEMDGSFPDIERDDMLARRFGTFQKSTSPVRPS
CPPISVVSYRPLKQQGKEQKTLQKAERSSPLTCATRHSLETPSPVSLSSAATCKDGFEKS
KDQDEHRTNAAGGKAGFRNPGKDDMMVRRTRDFPKQTGPSVSQFLPVPFSKQQNGGEATK
DLVKTEQKVKSITVTDSAVPEKHPKLCAESPQKLSAQPEHKLEDGKDRVPGVRQDGASSA
PHKDLLDSKPLQPGDSSEMQLTERNSQGFTSLKDGHAQTFGSRTPVSDDAESVSMFDMRC
ADEAAVMQPHSQARHEKLQTIHHQLKEEEDRWQDDLARWKSRRRSASQDLFKKEAERKKM
ERLLTGTEEASERRKSIKTYREIVEEKERRERALHEAYKNARSREEADNILQQYIERFTI
SEAVLERLEMPKILERSHSAEPNSSSPPKDPNPLRYLRQQSLPAPKYTAKVEATIAPAGG
SEATISTGRTSPSKPFVSKAVPMLTAKPYSQPKSTQQVLRTFKVDGKVSMNREAVNGVEE
ERERECTTLIFAPSPSRSPKSNSAVDGSSVEGEQNSRSTELVLKRLIEHSKDRAQTGVLT
EEAKSINQNEKTDSEILSPDHKEFSSTTVSRASPTVAMAEFSSVTNSSLSNHRKEMGSNE
EPKKLERGQLKDVEAPVIQKVETLEAPVQDGGIIFPLLKIIPERSQVVLQNSAPQAGTEN
SDKSNRFGCWSWDPEEERKRQERWQHEQERVLQERYQKEQDKLKEEWEKAQKEVEEEERK
YYEEERKIIEDTVVPFTVTSSSAEPLSTSSSVTDGNGTVNMVDVSYSEEEDKQKEDRTRK
NLFSEQDGVPFSKSKECEPWKENMSTVNKEEYIRTSKQRGNEQDPPQMSRTERLQPTEMT
LPLCQDVTWNQQLLSKQSPRLSDTKQKNFPSEHNLSLPVSSAREMRRAGCRESSGAGRSS
SSPCSPTTQSQSPNRYKRSVSGKKLCSSCGQPLGKGAAMIIETLGLYFHIQCFRCGICKG
QLGDAASGTDVRIRSGLLNCNDCYIRSRTAGQPTTL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgcacggagcggtgccctctcctcccatcgctgctggggacgcacggcggccgctggct
ttccccgcgcggcccccgggagagagccgagagccgccggagcccaggctccctccgtgc
tgcggcagcgggggcgcagctcgcctttgcagatggccagtccgggctcggggctgctgg
aggcgacgcagcctccgggggactcgccggagccagctttggctgaagcgcagcagtgga
tcgaggttgctgaattccataaagcctggtttggtcaaaaagatcaacagactgccaact
cccattgcaggactggacaatattgccttgttcttaagaggctgtaaggaattggggctt
aaagaatctcagctttttgacccagtagacctgcaggacaactcaagcaaagcaacggtc
aggaatcttgactgtagcagaaagctgaaaaatgttttagtcaccatctattggctgggg
aaaacagcaaacagcagcactggtttcagtggagcaacgctcaacctgagggagtttgaa
ggattgctaacgcagctgagaaaggagactgaggatgttgagagccccaagcgcagcatc
cgtgacagcggctatgtagactgttgggactccgaacgcagcgattccctttctcctccc
cgccacggaagagatgattcttttgacagcctggattccttcggctcccgctcccagcag
acgccgtctccagatgtggtgctgagaggaagcagcgatggcagagaaagcgattcggaa
tctgacttgccgcatcgaaagttgccagatgtgaaaaaagacgatatgtctgcaaggcgg
acatcttatggtgaacccaaatcagttgtgccttttaaccaatacctccccaataagagt
aaccagactgcctatattccggctcctctcaggaagaagaaggctgaacgagaggagttc
aggaagagctggagtactgctacttctcccctaggaggagagagacctttcagcaaaagc
caccctgaaactatcgaagaggaacaaaccgaagtactggcacaatctgaagaagagtgt
tcgggctgttgcgtgtctactgcaatcccctctgggaagcctgttcaagcagacgtgagc
caaggagagcctttacgtcattcgtctacacattctgccaagaaagcagcggggcccaga
aatcccgaaaaagatcccaaggaactgggcaagctacgaaggattgagcaggccggtatt
aagatcatgccggctgtgcaacgctatggtagcagtcaattgcacatgtgcaaaatggat
gagcttatcccagacatcctccttcgcaaagagaacccctttatgctgagctatcagcga
aaagattctgggtccgaagacgaacgagatgacaggattcctgacctagagaaggatgat
tttgctatacgcagagcaagactaaatcagcccaaacttacgttgccatttaaccagtat
ctacttggatcttatgcaaacaaagatcgaggtaaagtggaagaagggaagaaacaaaag
aaaaagcaggaatgttcaagtggacagaagatgagtgtgacttcagcgaggccgatggtg
atatgcgaagacaaaccattcccgcagtcacagaaggacgactctaaggagaaagaccaa
tctaaatttccagatgttcaaagagatgacctggctaagcgaaatactcaggctagcctc
tcccaagtagatttgccatgttttgcgagagctactataacacaagcagatcaagacacc
tgggaccgactgaaagtttcagggaattccagcgacgaggagctcacgaacgccccaggt
tcatttctgacctctgaaacggcagtggaagctgccggtcgtaaccgttttgcaagccgc
aaagtgagaatgtccgagaagcccagcagccccaagcagagtgaagttatggatgcatgt
aattcatctctctcggatgcttgtgctgattctcagaagcaaacgccaagcagtttgagc
gagtggcacgagagcagcgaggaagagatggatggcagcttcccagatattgagagggat
gatatgctggctagaagatttggaacttttcagaaatctactagccccgttcgcccatct
tgtcctcccatttcagtagtcagttatcgtcccttgaaacagcaaggaaaagaacagaag
actctgcagaaagcagaaagaagttccccgttgacttgtgcgacacgacattctttggaa
acaccttcccctgtatccctaagctctgctgccacatgcaaagatggctttgagaagtct
aaagaccaagatgagcacagaactaatgcagcaggaggcaaagcgggattcaggaatcca
gggaaagatgacatgatggtgagaagaaccagagattttccgaagcagactggaccaagt
gttagtcagttcctcccagttcctttctcgaaacagcagaatggtggggaagcaactaag
gatcttgtaaagactgaacagaaagtcaagagcattaccgtgacggactcggcagtcccc
gaaaagcatccaaagctttgtgcagaaagccctcaaaagctttcggcgcaacctgagcac
aaactggaagatgggaaagacagagtccctggtgtgaggcaagatggtgcctcttctgct
cctcataaggacttgctggactccaagccactccagccaggagattcttcggagatgcag
cttactgaaagaaacagccaaggatttacgtctttaaaggatggacatgcacaaacattc
ggctccagaactcctgtgtctgatgacgcagagagcgtgagcatgtttgacatgaggtgc
gcagacgaggctgccgtgatgcaacctcatagccaagctcgccacgagaagctgcaaact
atccaccaccagctcaaagaggaagaggaccggtggcaagatgacttagccaggtggaaa
agtcgccggagaagtgcttctcaggacttatttaaaaaagaagccgagagaaagaagatg
gagagactactgactggcactgaggaggccagtgagcgaaggaaaagcataaagacctac
agagaaattgtggaagagaaagagaggcgcgagagagctctgcacgaagcgtacaagaat
gccaggtcacgcgaggaagcggataatattctccagcagtacatcgagaggttcaccatt
agcgaagctgtccttgagcgcttggagatgccaaaaattctggagagaagccattcagcg
gagccaaattcgtcgtccccacccaaggaccctaaccccctgagatacttacggcaacaa
tcgctccccgcccccaagtacactgccaaggtagaggcaaccatcgctcccgccggcggg
tcagaagccaccatctcgacaggccgcacctctccaagcaaaccgtttgtctcgaaggct
gtgcctatgttgactgccaagccttactcgcagcccaaaagcacacagcaggtgttgaga
acctttaaggtggatggaaaagtcagcatgaacagagaagctgtcaacggagtggaagag
gaacgagagagagaatgcacaacgttaatatttgccccttcgccaagccgatcgccaaag
tccaacagtgcggtggacggttcctcagtggagggggaacaaaacagccgtagcaccgag
cttgtcctaaagcggctcattgagcacagcaaagacagagcgcagacgggcgtcttgacg
gaagaagctaaatcaatcaaccaaaacgagaaaactgattcagaaatactgtctccagac
cacaaagaattcagcagcacaaccgtttcccgtgccagccctactgtggccatggcggag
ttctcttccgtcacaaactcttccctcagtaatcatcgcaaggaaatgggctcaaatgag
gagccgaagaaacttgaaagggggcaactgaaggatgtagaagcaccagttatccagaag
gtagagactttggaagcccctgtgcaagatggaggaatcatatttccacttttgaagata
atccccgagaggagccaagtggttttgcagaattctgccccacaagctggcactgagaac
agtgacaaatcaaatcgctttggttgctggtcttgggacccagaggaggagcgtaagcga
caagaacgatggcagcatgaacaggaacgtgtacttcaggaaaggtatcagaaagagcag
gacaagttgaaagaagaatgggaaaaggctcaaaaggaagttgaagaggaggagcggaaa
tactatgaggaggaacgcaagatcattgaggacactgtggtaccattcacagtcacttcg
agctctgcggaacccttgtccacgtcttcctctgtgacggatggaaatgggactgtgaat
atggtggacgtgagctactctgaagaggaagataagcaaaaggaagatagaactcggaag
aatttattttctgagcaagatggtgttcccttttcaaaaagcaaagaatgtgaaccatgg
aaggagaatatgagcactgtaaataaagaagaatatataagaaccagtaaacagagagga
aatgagcaagaccccccacagatgtccaggacagaacgtctacagcccactgagatgact
ttgccactgtgccaggatgttacgtggaatcagcagttattaagtaaacagagcccacgt
ctttcagacacgaaacagaaaaactttccgtcggaacataatttaagtctgccggtcagt
tctgcaagagaaatgaggagggcaggctgtcgagagagctctggagctgggcgatcatca
tcatcaccctgttctcctacaactcaaagccagtcacccaacaggtacaaaaggtctgtc
agcggaaagaaactctgctctagctgcggacagcctcttgggaaaggcgctgccatgatt
atcgaaacactcggtctttatttccatattcagtgcttcaggtgtggaatctgcaagggg
caacttggagatgcagcaagcggaacagacgtccggattagaagtggtcttctcaactgc
aatgattgttacatcagatccagaaccgctggtcagcccacgactttgtga
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integrated database retrieval system
