Podarcis raffonei (Aeolian wall lizard): 128421349
Help
Entry
128421349 CDS
T09310
Name
(RefSeq) LOW QUALITY PROTEIN: protein SOX-15-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128421349
Transcription factors [BR:
praf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128421349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128421349
NCBI-ProteinID:
XP_053260004
LinkDB
All DBs
Position
9:60439337..60440369
Genome browser
AA seq
262 aa
AA seq
DB search
MFAVFPAEAPLPQEPGGAPIPAAAAPRALPPPAAPEDPLEKVKRPMNAFMXWSSAQRRKM
AQEHPKMHNSEISKRLGAAWKLLPDAEKRPFVDEAKRLRALHMKDYPDYKYRPRRKGGSG
RARDKGAPAAAASPGTFPCAPTAETRAWSAYAAAPGGTPDGRGACYPYELAQGGPGGGGG
YGAGFPAPYSTLTYGAQPSPMVATMIKQEGGLQQFHHSFGDFHDVMTAYSLQACDAAEGA
PQYCISQHPYLGFSNTPPLTHL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgttttccccgcggaagctccgctgccgcaagaacccggaggggccccgatc
cctgctgctgctgcccctcgggcgcttcctcctcctgctgcccccgaggaccccctggag
aaagtcaagcgccccatgaacgccttcatgntgtggtccagcgcgcaaaggcgcaagatg
gcgcaggagcaccccaagatgcacaactcggagatctccaagcgcctgggcgccgcttgg
aaactgctgcccgacgccgagaagcggcccttcgtggacgaggccaagcgcctccgggct
ctgcacatgaaggactaccccgattacaagtaccggccccggcgcaagggcggatccggg
cgcgcacgggacaagggcgcaccggcagcagcagcctcgccaggaacctttccgtgcgcc
ccgacggccgagacgcgcgcctggagcgcatacgctgccgctccaggagggacccccgac
ggcaggggcgcctgctacccttacgagctcgcccaaggaggacccggaggcggaggaggc
tacggggccggattcccggcgccctacagcaccctgacgtacggcgcccagccctccccg
atggtggccacgatgatcaaacaagaaggcggcttgcagcagtttcaccactcctttggc
gacttccacgacgtgatgacggcctattccctgcaggcgtgcgatgctgcggagggggcg
ccccaatattgcatttcccagcacccctatttggggttcagcaacacacctccgctgacc
cacctttaa
DBGET
integrated database retrieval system
