Podarcis raffonei (Aeolian wall lizard): 128421378
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Entry
128421378 CDS
T09310
Symbol
PKD2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
praf03037
]
128421378 (PKD2)
04040 Ion channels [BR:
praf04040
]
128421378 (PKD2)
Cilium and associated proteins [BR:
praf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128421378 (PKD2)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128421378 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
128421378
NCBI-ProteinID:
XP_053260075
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All DBs
Position
9:complement(65211971..65229051)
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AA seq
953 aa
AA seq
DB search
MAGLCPPGGLEHLELGRLRDPPGSGGGVVGASSPSPPPSSCSPSPPLSSCSRQAWSRDNP
GFEPEEEAGEAARAAGGSAAVAAGPVLQMGVVEWGRGGAPSPSEPDARRPGGPAESGRQR
RRRRRGEEGEGGGEGEGQRPCSAGGAPTPTPRFPHEETGEEVAEQPPPRRLAWAKGMAHR
LRGLWGTTLMEETTTRERYLKSVLRELITYLIFLLVLSFLSYGMVNSNMYYYTRVMSQLF
LDTPVSKMEKTNFKTLSTMEDFWKFTEGPLLDGLYWEMWYNNRTVAENRSFIYHENLLLG
VPRIRQLKVRNGTCSIPEDLKDEIKDCYDVYSVSNEDTAPFGPRNGTAWIYTNEKDLNGS
SHWGLLATYSGAGYYQDLSRSREETSALIHGLKNSLWLDRGTRATFLDFSVYNANINLFC
IIRLLVEFPPTGGLLTSWQFQPVKLIHYISTFDFFLAACEIVFCLFILYYVVEEILEIHI
HRLFYFRSLWNCLDVLIIVLSVAAIGINIYRTSTVDRLLKELLENQNNFPNFEPLAYWQT
QFNNIAAVTMFFVWIKLFKFISFNRTMNQLSTTMSRCAKDVLGFAIMFFIIFIAYAQLAY
LVFGAQVDDFSTFQDSVFTQFHILLGDFDFTEIEEANRVLGPVYFTTFVFFMFFILLNMF
LAIINDTYSEVKSDMAQQKSEMELSDLIRKGYTKAMVKLKLKKTPVDDISESLRQSGGKL
NFDELRQDLKGRGHTDAEIEAIFTKYDQDGDQELTELEHQQMRDDLEKEREDLELDRSSL
NRPLSGRSFPRSLDDSEEDDDDDSGHSSRRRGSSSSGVSYEEFQVLVRRVDRMEHSIGSI
VSKIDAVIVKLEAMERAKLKRKEVLGRLLDGVTEDDRLGRDNEVHRDQMERLVREELERW
ESDDTASQVSHRLGTPMGLNGQSRARSSRPSSSQSTEGIDAGGGGNSGNNVHV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcgggactttgccctcccggcggcctggagcacctggagctggggcggctgcgggac
ccgccgggcagcggcggcggagtcgtcggcgcttcttctccttcgcctcctccttcgtct
tgctcgccgtcgccgccgctctcgtcttgctcgaggcaggcctggagccgggacaacccg
ggcttcgagcccgaggaggaggcgggcgaagcggccagggcggctggcgggagcgcggcg
gtggcggcggggcccgtgctgcagatgggcgtggtggagtggggccgaggaggggcgcct
tcgccctccgagcccgacgcccggcgcccgggagggcccgccgagagcgggaggcagcgg
aggcgcaggcggcgcggcgaagagggggagggcggaggggaaggcgaaggccagcggcct
tgctctgccggaggcgccccgacgcccacgccgcgtttccctcacgaggagacgggcgag
gaggtcgccgagcagccgccgcctcgccggctcgcctgggccaaagggatggcgcaccgc
ctgcgaggtctgtggggtactaccctaatggaagaaaccacaaccagagagagatatctg
aaaagtgttttacgagaactgatcacgtacttgatttttctcctggtcttgtctttcttg
tcatatgggatggtgaattcgaatatgtactactacacaagggtgatgtcacagctcttt
ctagacacaccagtgtcaaaaatggagaagaccaattttaaaactttatctacaatggaa
gacttctggaagttcactgagggtcctttgctagatggcctgtactgggagatgtggtac
aacaacagaaccgtggcagagaacaggagttttatctaccatgagaacctgcttttggga
gtgcctcgcattcgacagctgaaagtgaggaatggcacgtgttcaatacctgaagattta
aaagatgaaattaaagactgttacgatgtttactctgtgagtaatgaggacactgcacca
ttcgggcctcgcaatggaaccgcttggatttataccaatgaaaaagatctgaatggaagc
agccattgggggttgcttgcaacttacagtggagctggctattaccaggatctgtccaga
agcagagaggagacatctgcgttaattcatggccttaagaacagcttgtggcttgacaga
ggcacacgggcaacatttctagatttttcagtgtacaatgcaaacatcaatctcttctgc
attatcaggttattggtggagttcccaccaacaggaggcctccttacatcttggcaattc
cagcctgtaaagttgatccactacatttccacttttgacttcttcctggctgcctgcgaa
attgtcttttgtctttttattctttattacgtggtggaagaaatcctggaaattcacata
cacagactcttttatttcaggagtctttggaattgtcttgatgttctcattattgtgcta
tcggtggcagctataggaattaatatatatcgaacatctactgtggataggttactgaag
gagctgctggaaaatcaaaataacttcccaaattttgaacctttagcatactggcaaaca
cagttcaacaatattgcagctgtcaccatgtttttcgtctggattaagctctttaaattt
atcagcttcaaccgaacaatgaaccagttatctaccacgatgtcacgatgtgccaaagat
gttcttgggtttgccattatgtttttcatcattttcatagcctatgctcagctagcttac
cttgtgtttggtgcacaagttgacgatttcagtaccttccaggacagtgtttttactcag
ttccacatcctgttgggagattttgactttacagagattgaagaagctaacagagttttg
ggaccagtttatttcactacatttgtgttctttatgttcttcattcttttgaacatgttt
ttggccatcatcaatgatacatactctgaagtcaaatcggatatggcgcagcagaaatct
gaaatggaactgtcggatcttataagaaagggttacactaaagccatggtgaaattaaaa
cttaaaaaaacaccagttgatgacatttcagagagtctgcgacaaagcggaggcaaattg
aactttgatgaactgcggcaagacctgaagggaaggggacacactgatgccgagattgaa
gccatctttacaaagtatgaccaagatggagatcaggaattgactgagctagagcatcag
caaatgagagatgatttggaaaaagagagagaggacttagagttagacagaagctctctg
aatcgtccgctgagcggccgtagcttcccacgaagcctggatgactctgaagaggacgac
gatgacgacagcggacacagctcccggaggagaggcagcagctcgagcggggtttcgtat
gaagaatttcaagtgttggtgcggcgagtggatcgcatggagcattccataggcagcatt
gtttctaagattgacgctgtcatcgtgaagctggaagccatggagagagcaaaactgaaa
aggaaagaggtcctgggaaggctgcttgatggggtcacagaggacgacaggctgggccgt
gataatgaagtccacagggatcagatggagagacttgtacgagaagagctggagcgatgg
gaatcggatgatacagcatcccaagtgagccacagactgggaactccaatggggctcaac
ggccagtcccgggctaggagttcccgcccttcttcctcacagtccacggaaggcattgat
gccggaggaggtgggaacagtgggaacaatgtccatgtctag
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