Podarcis raffonei (Aeolian wall lizard): 128421499
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Entry
128421499 CDS
T09310
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128421499 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128421499 (NUP54)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128421499 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
AKAP7_NLS
GTP-bdg_N
XhlA
Motif
Other DBs
NCBI-GeneID:
128421499
NCBI-ProteinID:
XP_053260369
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All DBs
Position
9:70783657..70798841
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AA seq
499 aa
AA seq
DB search
MAFNFGPAAGAAAAPNPAGAFGGFGTANTTAGSTFSFSAPTNTGAGGLFSATQNKGFGFG
TGFGTGTGLGTGLGTGLGFGAFSTQQQQQPTLGSLFSQPAQAPAQSNQLINTASALSAPT
LLGDERDAILAKWNQLQAFWGTGKGYFNNSIAPVEFSQENPFCRFKAVGYSCMSNNKDED
GLVALVFNKKEAEIRSQQQQLVESVHKILGSNQTLTVNVEGVKTMPDDQTEVVIYVVERS
PNGTSRRVPSTTLYAHFEQANVKNQLQQLGVTLIMARTELSPAQVKQLLQNPPAGVDPII
WEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTT
MAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFK
GRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIVKDDLEDI
KLIEHGLNESLPIRGGVFS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcgggccagccgccggcgctgcagccgcccccaaccctgcgggggcc
tttggaggatttgggacagcaaacaccacagctggatctacgttcagcttctcggcacct
accaacaccggggctggtgggttgtttagtgctacccagaacaaggggtttggatttggt
actggcttcgggacaggtaccggccttggcacaggtttgggaactggtttgggatttgga
gccttcagcacccagcagcagcagcaaccaaccctaggaagcctcttcagtcagccggct
caagcccctgcccagtctaaccagctgataaacacagcaagtgccctttctgcacccaca
ctgttgggagatgagcgagatgctattttggccaagtggaaccagctgcaggcattttgg
ggcacaggcaaaggatatttcaacaacagcattgccccagtggagttctcgcaggaaaac
cccttctgcaggtttaaggctgttggctatagctgcatgtccaacaacaaggatgaagat
ggcttggtagcactggtcttcaacaagaaggaagcagaaattcgaagccagcagcagcag
cttgtggaatctgtgcacaaaatcttaggttcaaaccagactctcacagtcaacgtggaa
ggtgtgaagaccatgccagatgatcagactgaagtagtcatctatgttgttgagcgatct
ccaaatgggacttccaggcgagtcccctctaccactctgtatgcacactttgaacaagcg
aatgtcaaaaaccagctgcagcagcttggagtcaccctcatcatggccaggacagagctt
tctccagcgcaggtcaagcagctgctacagaatcctcctgcaggagttgatccaatcatt
tgggaacaggccaaagttgacaatccagatcctgaaaagctgattccagtgccgatggtt
ggtttcaaagaactgctgaggaggttgaaagtccaagaccaaatgacaaagcagcatcaa
accagattagatataatatcagaagacataagtgagcttcagaaaaaccagactacaacg
atggccaaaatagctcagtacaagcggaagctaatggatctttcacacagaacattgcag
gtgttaatcaagcaagagatccagaggaaaagcggctatgccatccaagccgatgaggag
cagcttcgcgtacagttggatacgatccagtgtgaactcaatgctcccacgcagttcaag
ggccggctgaatgagttgatgtcccagatcagaatgcagaaccattttggagctgtgaga
tcggaagagaggtactacatcgatgcagacctcttgcgggaaattaaacagcatctgaag
cagcaacaagaagggctcagtcacctgatcagcattgtaaaagatgacctggaagatata
aagctcatagaacatggattaaatgagagcttacctatcagaggaggggtgttcagttga
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