Podarcis raffonei (Aeolian wall lizard): 128421512
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Entry
128421512 CDS
T09310
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010
MAPK signaling pathway
praf04020
Calcium signaling pathway
praf04144
Endocytosis
praf04510
Focal adhesion
praf04540
Gap junction
praf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128421512 (PDGFRA)
04020 Calcium signaling pathway
128421512 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128421512 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128421512 (PDGFRA)
04540 Gap junction
128421512 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128421512 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
praf01001
]
128421512 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
praf04090
]
128421512 (PDGFRA)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128421512 (PDGFRA)
Protein kinases [BR:
praf01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
128421512 (PDGFRA)
CD molecules [BR:
praf04090
]
Proteins
128421512 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
128421512
NCBI-ProteinID:
XP_053260385
LinkDB
All DBs
Position
9:complement(26862874..26927097)
Genome browser
AA seq
1114 aa
AA seq
DB search
MAAYRKERGAVVETELSPPAKLMIVMGPSRRTILIVGCFLTGPWLASCQSLLPTILPNND
EMVVQLNSPFTLKCSGDSEVSWQHPIPDGNHTIDLKSEENNSGLFVTVLDVANASASHTG
LYTCYYNHSQDEDEDGEVEGKDIYVFVPDPAVPFVPTFPEDEFIVITEEEESSTIPCRTS
DPNTQVTLTTREGKIVYAFYDNRQGFIGNFSAGSYLCKTTVKGKEFRSGEFVIYIYKATS
YIHVEIESPKTVYKTGETIVVTCVVLDNEVVNLQWNYPGKVKNKGTISLEDIKIPNQKLV
YNLTIPDASVEDSGDYECAALHVTKDFKKMKRVVITVHDKGFIHLEPHFNPMEAVNLHEV
KKFVVDVHAYPEPKMFWLKDNVTLMENLTEIVTKSQQIQETRYQSLLKLIRAKEEDSGYY
TFVAQNEDETQRYIFSLLIQVPALIRDLVDSHHDSAGQTVTCLAEGTPLPDVEWLVCKDI
KKCSNDTSWTFLMNNISDITMETHLDQKNMVESRVTFQKVEETLAVRCMARNDLGTVTRE
LKLVAPTLRSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYI
YVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA
RSSEKKALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNY
LNRHPEKPKKDLDIFGMNSADESTRSYVILSFENNGEYMDMKQAETMQYVPMLERKDRSK
YSDIQRSLYDRPASYKKKYVSELDVKNLLSDDDSEGLTLLDLLSFTYQVARGMEFLASKN
CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYT
TLSDVWSYGILLWEIFSLGGTPYPGMMVDSMFYNKIKSGYRMAKPDHATSEVYDIMVKCW
NSEPEKRPSFYHLSEIVENLLPGEYKKSYERIHLDFLKSDHPAVTRMRADCDNTYIGVTY
KNEDKLKDRESGFDEQRLSADSGYIIPLPDIDPVSEDELSKRNRHSSQTSEESAIETGSS
SSTFVKREDETIEDIDIIDDIGMDSSELVEDSFL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttatcgcaaagagaggggggcggtggtggaaacggagctttcgcctcctgcc
aagttgatgatcgtcatgggtccctcccgaagaacaatcctgattgtgggctgcttcttg
acagggccatggctagcctcttgccagtctttgcttccgactattctgccaaacaacgat
gaaatggttgtgcagctgaattcccccttcaccctgaaatgttctggagacagtgaagtc
agctggcaacatccaatacccgatggcaaccataccatagaccttaaaagcgaggagaac
aacagcggcctgtttgtgaccgtgcttgatgtggcaaatgcttctgcttctcacactgga
ttgtacacttgctactacaatcattctcaagatgaagatgaagatggtgaggtggagggg
aaggacatctatgtctttgtgccagatccagctgttccctttgttccgacattcccagaa
gatgagttcattgtcatcaccgaagaagaagagtcctccaccatcccttgccggacaagt
gaccccaacacccaagtaactttgacgaccagagaagggaaaatcgtgtatgccttttat
gacaacaggcagggcttcatcggaaacttctccgcaggctcctatctgtgcaagaccacc
gttaagggaaaggagttccggtctggtgaatttgtcatctatatttacaaagctacatca
tatattcatgttgagatcgaatcccccaagaccgtgtataagacaggagaaaccattgtt
gtaacgtgtgtggtcttggataacgaagtcgtgaacttacagtggaattatccagggaaa
gtgaagaacaaaggtacaatttcacttgaggacatcaaaattccaaaccagaagttggtt
tacaacctgaccattccagatgcttcagtggaggacagtggagattatgaatgtgctgct
cttcacgtgaccaaagattttaagaaaatgaaaagagtcgtgatcacagttcatgataaa
gggttcattcatctggaaccccattttaaccccatggaagctgtcaatcttcatgaagtt
aaaaaatttgtagttgatgtgcatgcatacccagagccaaaaatgttttggctgaaggac
aatgtgactctgatggaaaatctcacggagattgtcactaagtcccagcagatccaggag
acgaggtaccagagtttattaaaattaatccgtgccaaggaagaagacagtggatattac
acttttgtagcacagaatgaggatgaaactcaaagatatattttctccctgctcatacaa
gttccagctttaattcgagatctggtggatagtcatcacgactctgcggggcaaacggtg
acatgcttggcagaagggacaccactccctgatgtggaatggctggtttgcaaggacatt
aaaaagtgcagtaatgacacctcgtggaccttcctgatgaacaatatctctgatatcacc
atggagactcaccttgatcagaaaaacatggtagaaagccgggtgacctttcagaaggtg
gaagaaacactggctgttcgctgtatggcaaggaatgacctcggcactgtgacacgggaa
ctgaagcttgtggctcccactttacgatcagaattgacggtggctgctgcggtcctagtg
ttgctcgtaattgtaataatttcgctgattgtcctggtaatcatatggaagcagaaacca
agatatgaaataagatggagagtcatcgagtccatcagcccggatggacatgaatacatt
tatgtggaccctatgcagctgccatatgactcaagatgggaatttccacgagatggatta
gtactaggacgaatccttggctctggagcttttgggaaagtagttgaaggaactgcttat
ggattaagccggtcacagcctgtgatgaaggtggctgtgaaaatgttgaagcccactgcg
agatccagcgaaaagaaggctcttatgtctgaattaaagataatgacccatcttggaccc
cacttgaacatagtgaacttgttaggagcttgtacgaagtcaggtccaatttatatcata
acggaatattgcttttatggagacttggtgaactacctgcataaaaatagggacaactat
ctgaaccgacatcctgaaaagcccaagaaggacctggacatctttgggatgaactcagct
gatgaaagtactaggagctatgtaatcctatcctttgaaaacaatggtgaatatatggat
atgaaacaagcagagacgatgcagtatgtgccaatgctagaaaggaaagacagatcaaaa
tattctgacatccaaaggtcattgtatgataggcctgcttcgtataagaaaaaatatgtg
tcggaactagatgtgaagaacctcctctctgatgacgattcagaaggcctcactttgttg
gacctcctcagcttcacttaccaagttgcacggggaatggaattcttagcttctaaaaat
tgtgttcaccgtgatttggcagcacggaatgtccttctggctcaaggaaaaattgtgaag
atctgtgactttggtctggctagagacatcatgcatgattcaaactatgtgtctaaaggc
agtaccttccttccagtgaaatggatggcacctgaaagcattttcgacaacctgtataca
acattaagtgatgtctggtcttatggcattctgctgtgggaaatattttctcttggtggc
actccatatcctggcatgatggttgattctatgttctataataaaattaaaagtggctac
cgaatggcaaaaccggaccatgctaccagtgaggtgtatgacatcatggtgaaatgctgg
aacagtgaacccgagaaaagaccttctttttaccacctgagtgaaatagttgagaacctg
ttgcctggagaatacaagaagagctatgagagaattcacttggacttcttgaagagtgac
catcccgctgtcacacgcatgagagcggactgtgacaacacctacattggagtcacttac
aagaatgaagacaaactgaaggacagggagagtggatttgatgaacaaagactcagcgcc
gacagtggctacataatccccctgccggatattgaccctgtttcagaagacgaacttagc
aaaaggaacaggcacagttcccagacttctgaagaaagtgccatcgaaactggttccagc
agctccacattcgtaaagcgagaggacgagaccattgaggatattgacatcatcgatgac
attggaatggattcctcagaactggttgaggacagtttcctgtaa
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