Podarcis raffonei (Aeolian wall lizard): 128421607
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Entry
128421607 CDS
T09310
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
praf01001
]
128421607 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128421607 (TRIM24)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128421607 (TRIM24)
Protein kinases [BR:
praf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
128421607 (TRIM24)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128421607 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
ANCHR-like_BBOX
PHD-1st_NSD
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
128421607
NCBI-ProteinID:
XP_053260560
LinkDB
All DBs
Position
10:complement(54072308..54111647)
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AA seq
1044 aa
AA seq
DB search
MDEPMAGAGPTPAGPVAMGGENEAESRQGPADRADGESRLNLLDTCGVCGQNIQSRRPKL
LPCLHSFCVRCLPPPHRYLMLPPPAAPSPGAGGPKDPPLPPPPPLLQPSPAPSSPVATPP
SPLHCNPVGVVRCPICGQECAERHIIDNIFVKDTTEVPSSTVEKSNQVCTSCEDNAEANG
FCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQLKLY
CETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLVTKLMEKSKYIKYTGEQIQNR
IHEVNRNQKLVEQDIKVAIFTLMVEINKKGKALLHQLECLAKEHRMKLVQQQQEVAGLSK
QLEHVMDFSKWAVASGSSTALLYSKRLITYRLRYLLRARCDALPVSNTTTVFHCDPSFWA
QNIFNLGSLVIEDNETPPHMPKSPVMEPNIQPQSGLPSNQLSKFPTQISLAQLRLQHMQQ
QVLAQRQQAQRRAGPVGLPNPRIAGPMYQTPPPPPPPPQQPPPRLVNFQNHSLKPNGSVP
PAQPMRFPQNQNIPQSAVRPNPLQMAFLAQQAIKQWQINSGHASATPSNASSTTSTPSSP
TINSAAGYDGKTPVPPMIDLSSTMGGSYTLPSLPDIDCAGSISLESIGRREGIVEQSQPK
PPSRKTVQSPNSSVPSPGLSGAVVHPPIRSPSASSVGSRGSSGSSSRPSGADSTQRVPVV
MLEPIRIKQESGVPSEHYDFPVVIVKQETDEESRKQNTRFPGNLLTSMLLNNNRNRSSEA
TVLRTEAPDSTGDQPSNGKAAWIGTPHVGESRKDDDPNEDWCAVCQNGGELLCCDKCPKV
FHLSCHVPTLRNFPSGEWICTFCRDLFKPEMEYDCDGPSHVTEEKRKLEGNMGLPPMDQR
KCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKNRLQLHHPLYTKPEDVV
ADFRLIFQNCAEFNEPDSEVADAGMKLEAYFEELLKNLFPERKFPAQPYCRADRDSPNST
DDSDDDFVQPRKKRLKWEERHFVK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcctatggcgggagcagggcccaccccggccggtcctgtcgccatgggtggg
gaaaacgaggctgaaagtcggcaaggccccgcggaccgggccgacggagagtcgcggctc
aacctgttggacacttgcggggtgtgcggccagaacatccagagccggcggcccaagctg
ctgccgtgcctccactcgttctgcgtgcgctgcctacccccgccgcatcgctacctcatg
ctgccgcctcccgcagcgccttcgccgggagccggcggccccaaagacccgccgctgcct
ccgccgccgcctttgcttcagccttccccggccccctcgtcgcccgtcgccacgccgccc
tcgccgctgcactgcaacccggttggtgttgttcgttgcccaatttgtggccaggaatgt
gcagaaagacacatcatcgataacatatttgtgaaggatactactgaggttcctagtagt
acggtggagaagtcaaatcaggtttgtacaagctgtgaagacaatgcagaagccaatggt
ttttgtgtggagtgtgttgaatggttatgtaagacctgcatacgagctcatcaaagggtg
aaattcacgaaggatcatacagtcagacagaaagaggaagtatctccagaagctgttggt
gtaactagtcagcgacctgtgttctgtccttatcacaagaaggagcagctaaagctttat
tgtgaaacttgtgacaagctgacatgtcgggattgccagttgctggaacacaaagaacac
aggtaccagtttatagaagaagcctttcagaatcaaaaggttataattgacacattagtt
acgaagctgatggagaaaagcaaatatataaaatatacgggggagcagattcaaaatagg
attcatgaagtgaatcggaatcaaaagctggtggaacaggacattaaagttgctattttc
acattgatggtagaaataaacaaaaaggggaaagctctactccatcagcttgagtgtcta
gctaaagaacaccgaatgaagcttgtacagcaacaacaggaagtggcaggtctttctaag
caactggaacacgtcatggacttttctaaatgggctgtcgccagtggtagcagcaccgca
ttactgtacagcaaacgcctaattacatatcgattaagatacctccttagagcaaggtgt
gatgccttaccagtgtctaacaccaccaccgtgtttcactgtgatcccagcttctgggcc
caaaatatcttcaatttaggttctctggtaattgaagataatgagaccccaccacacatg
cctaaaagccctgtgatggaaccaaacatacagccacaaagtggcttaccttcaaatcaa
ctatccaagttcccaacacagatcagtttagctcaactgcgacttcagcacatgcagcag
caggtcctcgctcagaggcagcaggctcaacggagggcaggtcctgtggggctcccaaat
cctagaattgcagggcccatgtaccagactccaccaccaccaccaccacctcctcagcag
ccacctccacgtttggttaactttcagaatcacagcctcaaacccaatggctctgttccc
ccagctcagccaatgaggtttcctcaaaatcagaatataccacagtcagctgtacggccc
aatccactgcagatggcatttttggcacagcaagctattaaacagtggcaaatcaacagt
gggcatgcttctgctactccctcaaatgccagcagtacaacatccactccctccagtcct
accattaatagtgctgctggatatgatgggaaaacacctgttccacctatgatcgatctg
tcctcaacaatgggtggctcctatacactgccttctcttcctgatattgactgtgcagga
agcatttcactggaaagcattgggaggagagagggaattgttgagcagagccaacccaaa
cctccttcacgcaaaactgtccagtccccaaattcatcagtgccatctccaggcctttca
ggtgcggttgtccatcctccaattcgttcacccagtgcctctagtgttggaagtcgaggc
agctctggctcttctagcagaccatcaggtgcagattcaacccagcgagtccccgtggtc
atgttggagcctatcagaataaaacaagagtctggtgtgccaagtgaacactatgatttc
cctgttgtaatagtgaagcaagaaacagatgaagaatcccggaagcaaaatactaggttt
ccaggaaatttacttacctcaatgttgttgaataacaatcgcaatcgctcatctgaagca
accgtcttgagaacagaagcaccagacagtacaggtgaccaaccatccaatggcaaggca
gcatggatagggacacctcatgttggagaaagcaggaaagatgatgaccccaatgaggac
tggtgtgcagtgtgtcagaacggaggagagcttttgtgttgtgataaatgtcctaaagtg
ttccacctttcttgtcatgttcccacactcaggaattttccaagtggagaatggatttgt
acattctgccgcgatttgttcaagccagaaatggaatatgattgtgatggcccaagtcat
gtgactgaagaaaaaagaaaactggaaggcaatatgggattgccacctatggatcagagg
aagtgtgaaagattattactgtacctttactgccacgaaatgagccttgcttttcaagat
ccagttcctcccacggtgcctgactactacaaaataattaagaagccaatggacttgtca
accatcaaaaatagattgcaactgcatcatccactgtacacaaaaccagaagatgttgta
gctgatttcagactgatctttcaaaactgtgctgaatttaatgagcctgattcagaagtg
gctgatgctggcatgaaactggaagcttattttgaggaactgctgaagaacctttttcca
gaaagaaaattccctgcccagccttattgccgtgctgatagagatagtcccaactcaaca
gatgactctgatgacgactttgtacagccacggaaaaaacgtctcaaatgggaagaacgc
cactttgtaaaatga
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