Podarcis raffonei (Aeolian wall lizard): 128422142
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Entry
128422142 CDS
T09310
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04137
Mitophagy - animal
praf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128422142 (OPTN)
04137 Mitophagy - animal
128422142 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128422142 (OPTN)
Membrane trafficking [BR:
praf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128422142 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128422142 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
128422142 (OPTN)
Xenophagy
Cargo receptors
128422142 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEMO
CC2-LZ
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
128422142
NCBI-ProteinID:
XP_053261727
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Position
10:2075052..2093988
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AA seq
559 aa
AA seq
DB search
MSKKPLNCLADNGQCSKTEVENGHPSVPPPPLGTSTVEEMVQQMKELITENNELKEAMRQ
RNQAMKDRFEELSTWREKLKEEREFYETKFKEARQCLATKCVENEALKEQLQTLEEREEG
STKGCTVSKKEMAQELEQLRMQVVKLQAEKADLVAIISELQLKLNIGTDDSFVEIRMHEG
ELNGGVKEIQDLRGKTTRDAAAYVSRSLDEAKKKLETEELTVSQLLHSLRSETQKREALE
KELQEQKERILLENKTAEKGTQMEHEEEEVKERAESVGDEVETLNLQVSALFKELQETHA
KLKDAEIIQKKLQEKCQALESQQHGESAGDLDEKQQLLYTIKKLELQVESMQSEIKLEEA
RANEEQQKFNTLQDAYSKLVPELTKAKQTVEELKDKEAERLNKATAEELIHRLDMAEEAL
AAKQFQIDEMKQTIARQEEELETVTILRAQMELYCSDFHAERAAREKIHEEKEQLAAQLA
YLLTEKQDHEDLGRNMLAEMQTRHRLPSDQGQSHFSQGGTEDRVWQQQQRSVQIHSCPKC
GMILPDMDTLQIHVMDCII
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagccattaaattgtcttgctgataatgggcagtgtagcaagactgaggtg
gaaaatgggcatccaagtgtgccgcctcccccacttggcacatccacggttgaggagatg
gtccagcagatgaaagagctcattaccgagaacaatgagcttaaagaagccatgaggcag
cgtaatcaagctatgaaggatcgctttgaggagctttccacatggagagagaagctgaaa
gaagagcgggagttctatgaaactaaattcaaggaagccaggcagtgcttggcaaccaaa
tgtgtagagaatgaagccctgaaagagcagctccagactctggaagagagagaggaaggg
tccacaaagggatgcacagtttccaaaaaggagatggcccaggagctagagcagctgagg
atgcaagtggtgaagctgcaggctgagaaggccgatctggttgccatcatttcagagctg
cagcttaaactcaacattggaactgatgactcatttgtggagatcaggatgcacgaagga
gaattaaacggaggtgtgaaagaaattcaagaccttcgtggcaaaacaacaagggatgca
gctgcctatgtgagcagatctctggatgaagcaaaaaaaaagttggaaaccgaagagttg
actgtcagccagcttcttcattccctcaggagcgagacccagaagagagaagccttggaa
aaggagctccaggagcagaaggaaagaattctgttagaaaataaaactgcagagaaaggc
actcagatggaacatgaggaggaggaagtaaaagagagagcagaaagtgtgggtgatgaa
gtagagactctaaacctacaagtgtctgccctgttcaaagaacttcaggagacacatgct
aaattaaaagatgctgagataatccagaagaagctgcaagagaagtgccaggctcttgag
agccagcaacatggtgaaagtgctggagacctggatgagaagcagcagctgctgtacacc
attaagaagctggagcttcaagtggagagcatgcagtcagaaatcaagctggaggaagcc
agagcaaacgaagagcaacagaaatttaacacattgcaggatgcttatagcaagcttgta
cctgaactgaccaaagcaaagcagacagttgaagaactaaaagacaaagaggctgaaagg
ctcaataaggctacagctgaggaactcattcacagactggatatggcagaggaagcccta
gctgccaaacagttccagatagatgaaatgaagcagaccattgctaggcaggaggaagaa
ctggaaactgtgactatcctccgagctcagatggagctctattgttctgacttccacgct
gaacgagcagcacgggagaagatccacgaggaaaaggagcaactggctgcccagctagcg
tacttgctgacagagaagcaagaccatgaagatctcggaaggaatatgctggcagaaatg
caaactcggcacagactcccatcagatcaaggccagtcccacttttctcaaggaggaaca
gaagatcgggtttggcagcagcagcaaaggagtgtccaaatacattcttgtccaaagtgt
ggaatgattcttcctgatatggacacacttcagattcatgtcatggactgtatcatctaa
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