Podarcis raffonei (Aeolian wall lizard): 128422170
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Entry
128422170 CDS
T09310
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128422170 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128422170 (DCP1B)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128422170 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
128422170 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
128422170
NCBI-ProteinID:
XP_053261810
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Position
10:complement(58895778..58932204)
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AA seq
608 aa
AA seq
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MAAAVAGAALLGKGLDISLAALQRHDPYICSIVDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPKYGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQQEQLKAQQGAGTGISPVSLNLGDSKEVDILRMLNKAKDEYTKCKMCS
EPKQITSSSAIYDNPNLIKPIPVKPSETQHQCIPQQVQNTDPEPQHLSLTTLFGKQEKSN
VYQDTSEQSQKLHQENFPLRQGVVRSLSYEEPGRHSPTAEKQLCPAIQKLMVRGAELHPV
SELPENRMCENGSVPSVGEVFTGLFKPVASHSIRTSHPVQDAASTRSLLQQLHSQSGQMR
KMEPSNVGPVSSAASVFTRAPAVSSGSQVKNVTQPHLMYFNGSLPGQTLGPPALGKEQSK
LPGQSLPLSGNQSGNSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQSSSTLK
PLDSWMDKASNTEKQPPLFQVISPQRIPATVAPSLLMSPMVFSQSAPAPPKPSEGGWLPV
VNQEAVSSSTNSLSVQNPEAAVTNSSSLTKLQLQETLLHLIQNDDNFLNIIYDAYLVSVR
KAALKKPM
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcggtggccggggccgccttactgggcaaggggctggacatcagcctggcg
gcactgcagcggcacgacccctacatctgcagcatcgtagacgtggccagccaggtggcg
ctctacactttcgggcaccgagccaatgagtgggaaaagactgatgtggaaggaacactg
tttgtttacacaagatcagcttcaccgaagtatggattcactattatgaataggctgagt
atggaaaatcggacagaacccataactaaagatctggatttccagttacaggaccctttt
ctgctttacagaaatgccagattgtccatttatggaatttggttttatgataaggaagaa
tgccaaagaattgcagagctcatgaaaaatttaactcagcaagaacaactgaaagcacag
cagggggctggcactggaatttccccagtaagcctgaatttgggtgacagcaaagaagtg
gatatcctacggatgctcaacaaagccaaagatgaatataccaagtgtaaaatgtgctca
gagccaaaacagataaccagttcttctgctatatatgacaaccccaacttgatcaaacca
atcccagtgaagcctagcgaaactcagcaccagtgtattcctcaacaagtccagaacaca
gaccctgaaccacaacacttatctctcacaacgctctttggaaagcaggaaaagtctaac
gtataccaagatacctcagagcagtcacaaaaacttcaccaagaaaactttcctctgagg
caaggggtggtgcgctctctgtcctatgaggaacctggaagacactcgcccacagcagag
aagcagctttgcccagccattcagaaactgatggtgcgtggagcagagcttcacccggtc
tccgaactccctgagaaccggatgtgtgagaacggcagcgtcccttcggtaggggaggtt
ttcacgggactcttcaagcctgtggcttctcatagtattcggacatctcatccagtccaa
gatgccgccagcacacgtagcctgctgcaacagctccatagtcagtcaggacaaatgaga
aaaatggagcccagcaatgtaggaccagtgagttctgctgcatcagtcttcaccagggct
cctgctgtctcctcaggatcccaggtaaagaatgtgacacagcctcatctcatgtatttc
aatggctctctcccaggtcagactttgggacctccagcccttggtaaagaacaatccaag
cttcccggacagtcccttcctctctctgggaaccaatctggaaattctggagtaatttca
ccacaagagttattaaagaaacttcagatagtgcaacaggagcagcagttgcatgtatcc
agtcggccaaccttggcagccaagtttcccgtggttactcagagcagcagcaccctaaaa
cctctggattcctggatggacaaagcttcaaacacagaaaagcagcctcctctttttcag
gtcatctcaccgcagcgaattcctgctactgtagctccttcactactgatgtccccgatg
gtgttcagtcagtctgccccagcaccgccaaagccaagtgaaggtggatggctgcccgtc
gtgaaccaagaagctgtttctagttccactaacagcctgtctgtgcagaacccagaagca
gctgttacaaacagcagctcactgacaaagctacaactacaggaaacgttactacatctg
atccagaatgacgacaacttcctaaacatcatctatgacgcgtaccttgtcagcgtgaga
aaagcagcactgaaaaaacccatgtga
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