Podarcis raffonei (Aeolian wall lizard): 128422198
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Entry
128422198 CDS
T09310
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf02010
ABC transporters
praf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128422198 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128422198 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128422198 (CFTR)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
128422198 (CFTR)
Transporters [BR:
praf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
128422198 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_29
SMC_N
AAA_21
RsgA_GTPase
T2SSE
Intein_splicing
DUF87
nSTAND3
Zeta_toxin
MeaB
Motif
Other DBs
NCBI-GeneID:
128422198
NCBI-ProteinID:
XP_053261880
LinkDB
All DBs
Position
10:complement(22735186..22821374)
Genome browser
AA seq
1483 aa
AA seq
DB search
MQRSPLEKANVFSKLFFRWTKPILRKGYRQRLELSDIYQIPATDSADNLSEKLEREWDRE
LASKKKPRLINALRRCFFWKFMFYGIILYLGEVTKSVQPLLLGRIIASYDPSNSHERSIA
YYLAIGLCLLFVARMLLLHPAIFGLHHIGMQIRIAMFSLIYKKTLKLSSRVLDNISTGQL
VSLLSNNLNKFDEGLALAHFVWIAPLQVLLLMGLLCEMLQASAFCGLGFLILVAFFQAWL
GRMMMKYRDQRAGKINERLVLTAEMIENIQSVKAYCWENAMENMIESVRQPELKLTQKAA
YVRYFNSSAFFFSGFFVVFLAVLPYALIYGIILRKIFTTISFCIVLRMAVTRQFPWAVQT
WYDSLGAINKIQDFLQKEEYKTLEYNLTTTGLELDKVTAFWDEGSAEFFAKAQQENGNRK
ISTASDGLFFSNFQLHFTPVLKDINFRIEKGEMLAVAGSTGAGKTSLLMMIMGELEPLEG
KIKHSGRISFCPQVSWIMPGTIKENIIFGVSYDEFRYKSVIKACQLEEDISKFPEKDDTV
LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDMLTEKEIFESCVCKLIVNKTR
ILVTSKLEHLKIADKILILHEGTCYFYGTFSELQGQRPNFSSELMGFDGFDQFSTDRRNS
ILSETLRRLSIGSDGMGAPNEIKRTSFKQTSNFVEKRKNSVMNALNSSRKFSFMQKTPLQ
VNGIEEGLGKPVERRFSLVPDSEQGEAILPRSNVINAGPTFREHRRQSVLNLMTRTSVHQ
RQSFYKKGNVSIRKMSVAHPSSETDIYARRLSMDSVAEISEELNEEDLKEYFCEDSETLS
AVTTWNTYFRYITVHKKLIIVLIICVVIFLIEVAASLAGVLIINKLSVSDSSNATRNASS
QDAEGYAVIITETSGYYIFYIYVGVADTLLALGLFRGLPLVHTLISVSKTLHRKMLHAIL
QAPMSSFNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLMLIVIGAIAVVSVIQPYIFL
ASVPVIGAFVMLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFETL
FHKALNLHTANWFLYLSTLRWFQMRIEMIFVVFFTIVTFVSILTTGNGEATVGIILTLAM
NIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEESKTAPSLKNGELSRTLIIENRHAK
EKTVWPSGGQMTVKNLTAKYIDGGLAILENISFSISPGQRVGLLGRTGSGKSTLLFAFLR
LLTTEGDIQIDDVSWNTVSVQQWRKAFGVIPQKVFIFSGSFRKNLDPYGQWTDEELWKVA
EEVGLKSVIEQFPGKLDFVLLDGGCVLSHGHKQLMCLARSILSKAKILLLDEPSAHLDPK
TFQVIKKTLKQAFANCTVILSEHRLEALMECQRYLVIEENKVTQYESIQKLLSEKNSFRQ
AISHSDRVRLFPVHPRNSSKRMSRPKITALQEETEEEVQETRL
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtcgcctctggagaaggcgaacgtcttctccaaacttttcttcaggtggaca
aaaccgattttgagaaagggttacagacaacgcctggaattatcagacatttatcaaatc
cctgccacagattctgcagataatctttctgagaaattggaaagagaatgggacagagag
ctggcttcaaagaaaaaacccagactcatcaatgctctcagaagatgttttttctggaaa
tttatgttctatggaataatactatatttaggggaagtaacgaaatctgtgcagcctctt
ttgctggggagaattattgcttcctatgatccgtccaattcacacgaacgatcaatagct
tactatttagccataggactctgccttctcttcgttgcgcggatgttgcttcttcaccca
gctatatttggcctccaccacatcgggatgcaaataaggatagcaatgttcagcttaatc
tacaaaaagaccttaaaattatcaagcagagtccttgacaatataagcactggacaactt
gttagcctcctttcaaacaatctgaacaaatttgatgaaggtttagctttagctcatttt
gtgtggattgcacctttacaagtcttgctgctgatgggacttctctgcgagatgctgcag
gcctcggcgttttgtggacttggtttcctaattcttgttgcctttttccaagcctggcta
gggcgaatgatgatgaaatacagagatcagagagcaggaaagatcaatgagagacttgta
ctcactgcagaaatgattgagaatatacaatcagtcaaagcttactgttgggagaatgca
atggaaaacatgattgaaagtgtgcgtcaacctgaactgaagctgacccaaaaagctgct
tatgtgagatatttcaatagctcagcattcttcttctctggattttttgtggtgttcttg
gctgtgcttccgtacgcactgatctacggaattattctcaggaaaatatttaccaccatc
tcattttgcattgttcttcgaatggcagtcactaggcagtttccttgggctgtgcagaca
tggtatgattctcttggagcaataaacaaaatacaggatttcttgcaaaaagaagaatac
aaaactctggaatataatttaacaaccacaggccttgagctggataaagtaacagccttc
tgggatgagggatctgcggagttctttgcaaaagcacagcaggaaaatggcaacaggaaa
atatccactgctagtgatggtctcttcttcagcaacttccaacttcattttactcctgtc
cttaaggacatcaacttcagaattgaaaagggagagatgctggctgttgcagggtctact
ggagcaggaaagacttctctcctgatgatgatcatgggagagctggagcctttggaaggt
aaaattaaacacagtggaaggatttccttttgccctcaagtatcatggatcatgcctgga
acaattaaagaaaacatcatctttggggtttcctatgatgaattccgatacaagagtgtc
atcaaagcctgtcagttagaagaggacatttcaaagtttccagaaaaagatgataccgtt
ttgggagaaggtggaatcactctcagtggtggtcagcgagccaggatctctcttgccaga
gcagtatataaagatgctgatttatatctcttggattccccttttggttatctagacatg
ttaacagagaaagaaatatttgaaagctgtgtttgcaaacttattgtcaataaaactaga
atacttgttacatcgaagctggaacatttgaaaatagcagacaagatactgattttacat
gaaggaacttgttatttctacgggacattttctgaacttcagggtcagagacccaacttt
agctctgagctgatgggatttgatggttttgatcagttcagcacagatcgaaggaactcc
attctaagtgaaacgctgaggagactttctatcggtagcgacggcatgggtgcaccaaac
gaaataaagagaacgtcttttaaacagacctcaaactttgtggaaaaaaggaagaactcg
gtcatgaatgcgctgaattctagcaggaagttctcctttatgcaaaaaactccactgcag
gtcaatggtatagaagaaggccttgggaaacccgtagaaagaaggttttcgttggtacca
gactctgaacaaggagaggcaattctgccacgcagcaatgtgatcaatgcaggacccacg
tttagagaacatagaagacagtctgtgcttaacttgatgacccgaacatcagttcaccaa
cgtcagagtttttacaaaaagggcaacgtatccatacgtaaaatgtcagtagcccacccg
tctagcgagacagatatctatgccaggcgcttgtctatggacagtgtggcagaaataagc
gaggagcttaatgaagaggatttaaaggaatatttttgtgaggattcagagaccttgagt
gctgttactacatggaatacatacttcagatatattactgtccacaaaaagttgattatt
gtgttaattatatgtgtagttatttttctaattgaggtggctgcttctcttgctggtgta
ttgattatcaataagttgtctgtttcagatagctcaaatgcaacaagaaatgcttcctcc
caagacgcggagggctatgcagtcatcattacagagactagcggctattacatcttctac
atttatgtgggagtggctgataccttacttgccttgggcctctttcgaggcctacccctg
gtgcatactctcatctcggtttctaaaacccttcaccgcaagatgctgcatgccatcctt
caggcacccatgtcttccttcaacacattgaaagcaggtggaatacttaacagattctca
aaggacatagcaatattggatgacctgctaccacttacaatatttgacttcatccagtta
atgctcattgtgattggtgctatagcagtagtatcagtcatacaaccctacatcttcctg
gcatctgtgcctgtgataggagcctttgttatgttaagagcatacttcctgcacacttct
cagcagctgaaacaactggaatctgaagcaagaagtccaattttcacacatcttgttaca
agcttaaaggggctttggacactcagagctttcggacggcaaccttattttgagacgtta
tttcataaagccctgaacttgcacacggcgaactggttcctttatctgtctacattacgt
tggttccagatgaggatagaaatgatttttgttgtcttcttcaccattgtgacctttgtt
tctattttaactacaggtaacggggaagcaacagttggcattattcttacactagccatg
aatattatgggaaccttgcagtgggccgtgaactcaagtatagatgtagacagtctgatg
cggtcagtgagccgagtatttaagtttattgatatgccaacagaagaatccaaaactgca
ccatctttgaaaaatggagagctttcacgcaccctcataattgagaataggcatgcaaag
gaaaagactgtctggccatctggtgggcaaatgacagtgaagaatctcacggccaagtac
atagatggaggactggccatactcgaaaatatttccttttcaataagtccaggacaaagg
gtgggtcttttaggaagaactggctcagggaaaagtacgctgctctttgcttttttaaga
ctcttgaccacagaaggagatattcaaattgatgatgtctcctggaacaccgtctctgtg
cagcagtggagaaaagcgtttggagtaatacctcagaaagtgttcatattttctggatct
tttcgaaagaacttggacccttatggacagtggactgatgaagaactttggaaagttgct
gaggaggttggactgaaatctgtaatagagcaatttccaggcaagcttgattttgtcctt
ttggacggtggctgtgtcctcagccatggacataaacaattaatgtgtcttgccagatca
attctcagcaaagcaaaaattcttctgctggatgaaccaagtgctcatcttgatcctaag
actttccaagtcattaaaaagactctcaagcaggcttttgcaaactgtacagtaatactc
tcagaacacaggctagaagcactaatggaatgccagcgatatttggtgatagaagagaac
aaagtcacgcaatacgaatccatccagaagctgctcagcgaaaagaattctttccgtcaa
gccatcagccattcagatcgtgtcagactcttcccggtgcatcccaggaactcaagcaaa
cggatgtccaggcctaaaattactgccttgcaagaagaaaccgaagaagaagtacaagaa
acccgattgtga
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integrated database retrieval system
