Podarcis raffonei (Aeolian wall lizard): 128422287
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Entry
128422287 CDS
T09310
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04510
Focal adhesion
praf04512
ECM-receptor interaction
praf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128422287 (LAMB4)
04518 Integrin signaling
128422287 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128422287 (LAMB4)
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GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
Rod_CreS
CCDC39
CCDC170_1st
HH_AprE
CCDC22_CC
Fez1
CCDC171
Motif
Other DBs
NCBI-GeneID:
128422287
NCBI-ProteinID:
XP_053262092
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All DBs
Position
10:complement(10287976..10348247)
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AA seq
1812 aa
AA seq
DB search
MPTKKWLPLAILFKLTLLTDFLLGQIPCENGFCHQPVGDLLVGRGDSLTASSTCGLFEPQ
KYCIIGYLEDEQKCFTCDSRYPYNPVFQAESHLIENVITTFEPDRKKWWQSENGLDHVSI
RLDLENLFQFSHLILTFKTFRPAAMLVERSTDYGQTWKVFRYFAQDCATSFPDIPSRPAT
TLGDVVCDSRYSDIEPSTEGEVVFKALDPSFEIEDPYAPYIQELITLTNLRINFTKLHTL
GDTLLGQKRRDPLEKYYYALYEMIVRGSCFCNGHASYCGPVQNLRGDVFHEPGMVHGSCL
CEHNTDGLSCERCKDFYNDAPWRPAEGSQENACQKCECNGHSESCHFDMAVYLSNNRISG
GVCEDCQHNTMGQHCDRCKLFFYQDPERTISDPRACIPCECDPEGTLYNGLCEDRTDPFL
GTTAGQCHCKENVEGVHCDKCKPNYYGLSGSDPLGCQPCSCNPSGSLSFSACDPVTGECL
CQRFATGQHCEECPQGYWGLGSNLHGCSPCGCDIGGAHNNLCTPTNGQCECLPNIVGRQC
SEPAPGYFFLPLDYYIYEAEDSMPLPGSSPLVQPTALPWCDVYFRQQGYDFKIENGKIVL
NRNKKRGIRKAAVGQDSLLFGRNPALDVVIRESVPGKPVTWSGPGFARVRNGAGLRFTVN
NIPFPMDFNIIIRYEPETLEDWIASIAVKTSGSRGSEHCGNTAALQEPHSLALPYTSRME
LLPAAACFEPGTEYFVDVYFSKSSASDPGTRSSILVDSLGLIPRISSVENFCDKNDLEEY
QQYHCIEIASEIGPHILPEACEKLIASLSARIHNGAVSCRCHPQGSINSNCEKLGGQCQC
KPNVMGRCCDKCSAGSHSFGSQGCLSCDCHPQGSVSALCDQVTGQCSCRPETDGRRCSQC
LAGYFGFPHCRPCPCNGFAELCDAQTGACLDCRGFTAGANCERCVDGYYGNPLKGEPCRP
CMCPDSPTSSRYFAHSCYQDPWTLLLVCNCLVGYSGDRCDECPGGFYRNPDAVASQCLPC
SCNNNIDVADPDSCDKDTGECLKCLHNTHGPSCEFCKPGYFGSAFLQNCRKCNCNPLGVD
PVKCPSGNGFCMCDQMTGICPCLPHVVGAKCDQCAAGYWNMVQGTGCRICDCNPRHSQNN
LCDQLTGQCLCKVGYTGRRCDACDENYFGDSQIHCFSCKCSTDGTLTPGCDKDTGACNCR
VGVTGRFCDQCARGYMQEFPSCRRCHVCFDQWDNAITSLSQKTQQLMRFAATLGDKRQTM
PGCDVDLKGHEDTISEIERILKSPTLLPEVLLSMKKEHGYIRQKVLEMYRQPGFLDQFPD
LNSMIEGIRKDADHLSETLQKMSELHQKNHYIHLQDSLNKINNYYQITLSAGERISGSKS
VLTHGGKTRSNTFRMLDDLVSKESAALGQLKLFNISDIQHLNEKICGLPGNFPCGVSDCG
GALCRDSKGNRHCGGPNCNGALPLSTNAIREGRQTVLLLNNLTNQMQGSEEKIEGIRKMT
GDTKKKASLMAEELEKNKDQIERERESIKLLIKRLKNFLVEESAPPEDIEKVANYVLGLQ
LPGSPEELRMVLDKLKSLMAHCEVSPTEVNGLSEQMEEAQGLLAKAQEAEKVAKSLPTPD
ELISSLKDIENIQRQTRDDFAKLNGTIEETKTKIAKAENHMDKTDDELVDFSEKQSELED
EIASLKTKLQMSRGQVTNAKSEAEKAQNQAVATNKEFANLKKEYASLQEKLKAKGLPLET
LEKLNRLRNEAEKLAKETEKKMKRIADLENKIQELNRIKQNKADQLRQLEDQVTAIKDEI
MQQSNKYAICKS
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaagaaatggcttccgctggccatccttttcaaactcaccctgctgacagac
ttcctgcttggccagattccctgtgaaaatggtttctgtcaccagcctgttggagatcta
cttgtgggtcgcggtgacagcctaacagcttcatccacatgcggactgtttgagcctcaa
aaatactgcattatcggctacctggaggatgagcagaaatgtttcacctgtgattccaga
tacccgtataatccagttttccaggctgagagtcacttaattgaaaatgttatcacaact
tttgagccagatcgaaagaagtggtggcagtctgaaaacggtcttgaccatgtcagcatc
aggctggatttagaaaatctgtttcagttcagccaccttatcctgactttcaagaccttt
cggcctgcagcaatgttggtggagcgctccacagattatggtcaaacctggaaagtattt
agatattttgcgcaagactgtgctacttctttccctgatattccttcgaggccagccacc
actcttggagatgttgtttgtgactcaagatattcggatatcgagccctctactgaaggg
gaggttgtttttaaagctctggatcccagctttgaaatagaagatccctacgccccatac
atccaagagctcattaccttaacaaacctgagaataaactttactaagcttcacacgctt
ggcgatactttactcggacaaaagcggcgtgatcctctggaaaaatactactatgcgctt
tatgagatgatagttcgcggaagctgtttttgcaatggccacgccagctactgtggccca
gtgcaaaatctgaggggtgatgttttccatgagcctggaatggtccatgggagctgcctc
tgcgagcacaacacagacggcttgtcctgtgagaggtgcaaagatttctacaacgatgct
ccctggaggccagcagaaggatcgcaggaaaatgcttgccaaaagtgtgagtgcaatggt
cattctgaaagctgccactttgatatggccgtgtacctttctaataaccgcatcagtggt
ggggtatgcgaagattgtcagcataataccatggggcagcactgtgatcgctgcaagctt
ttcttttatcaagatccagagaggacaatttcggaccctcgtgcatgtatcccttgtgaa
tgtgaccctgaaggtacattgtacaatgggctgtgtgaggatcgtacagacccatttctt
ggaaccactgctggccaatgccactgcaaggaaaacgtcgaaggagttcattgcgacaag
tgcaagccaaactactatgggctgagtggaagtgatcctctgggctgtcagccctgcagc
tgcaacccttcaggaagcttgtctttctctgcttgcgacccagtgactggagagtgtctg
tgccagcggtttgccactggacaacattgcgaggaatgccctcaaggatactggggcctt
gggagcaatctacacggatgttctccctgtggctgcgacattggtggcgcccacaacaac
ttgtgcacacctactaatggtcagtgtgagtgccttccgaacatcgtgggccgtcagtgt
tctgagccagccccaggctacttcttcttacctttggactattatatatatgaagctgaa
gactcgatgccactcccaggatcttcacctttggttcagcccacagctttaccatggtgt
gatgtctattttcggcaacaaggttatgatttcaaaattgaaaatggaaagatcgtattg
aacagaaacaagaaacgaggcataagaaaagcagccgttggacaggattcacttctgttt
ggcaggaacccagctctggatgttgttattagagagtctgttcctggaaaacctgtgaca
tggtcagggccgggttttgcacgagttcggaatggagcggggttaagatttaccgtcaac
aacatccctttcccgatggattttaatatcatcattcgctatgagccagagactttagaa
gactggatagcaagcattgctgtaaagacttcaggttctagaggaagcgaacactgcggg
aacacagcggccctgcaagaaccacactcacttgctctaccatatacatcaagaatggag
ctgctacctgctgctgcatgcttcgaaccaggaacagaatattttgtagatgtctatttt
tccaagtcttccgcctctgatccagggacccgttcatccatattggttgattcacttgga
cttattcctagaatcagttcagtggaaaacttttgcgacaaaaatgatttagaagagtac
cagcagtatcactgcattgaaatagcttcagaaattggaccacatatcctaccagaagca
tgtgaaaaactaatagcaagtctgtctgcccgtattcacaatggagcagtttcctgcagg
tgccatccacaagggtcaataaactctaactgcgagaaacttggaggtcaatgtcaatgc
aaaccgaatgtcatggggcgctgttgtgataaatgctcagccggaagccatagttttggg
tctcaaggttgtctttcatgtgactgccatcctcaaggatccgtgagtgctctgtgtgac
caggtgacagggcaatgttcatgccggccagaaacagatggccgacggtgcagtcaatgc
ctggctgggtattttggatttccccattgtcggccttgcccttgcaatggctttgcggaa
ctgtgtgacgctcagactggagcatgcttggactgcagagggtttacagctggagccaac
tgtgaaagatgtgtagatggttattatggaaaccctctcaaaggagagccgtgtcgtcca
tgcatgtgcccagactctccaacaagcagtaggtactttgcccattcctgttaccaagat
ccttggactttgctactagtctgcaactgtcttgtgggctattcaggtgatcggtgtgat
gaatgccctggtgggttctacaggaatccagatgcagtagccagccaatgtcttccatgc
tcctgtaataataacattgatgtggcagatccagactcctgcgacaaggacactggggag
tgtttgaaatgcttgcacaacacccatggaccaagctgcgagttctgtaaaccaggttac
tttggatctgcattccttcaaaactgtagaaaatgtaactgcaatcctttgggtgtggac
ccagtgaaatgcccatctggaaatggcttttgcatgtgtgatcagatgacgggaatatgc
ccttgcttgcctcatgtggtaggcgccaagtgtgatcagtgcgctgctggctactggaac
atggtccaaggaaccggatgtcgcatctgtgactgcaatccaagacattcccagaacaac
ttatgtgatcagctcacaggtcaatgtctgtgtaaagtgggctatactggaagacgttgc
gacgcatgcgatgaaaattattttggtgattctcaaatccattgtttctcgtgtaagtgt
agcacggacggcactctgacacccgggtgcgataaagacactggagcctgcaactgccgt
gttggggtcactggaagattctgtgaccaatgtgctcggggctacatgcaggaatttcct
tcctgccgtcgctgccacgtttgttttgatcagtgggataacgccattacttccctgtct
cagaaaacccaacaattaatgaggtttgccgcaacgctgggagataagagacagacaatg
cctggctgtgatgtagacctcaaaggccatgaagatacaatttctgaaatagaaagaatc
ctaaaaagccccaccctcttgccagaggtgctgttgagcatgaagaaggagcatggctac
atccgacaaaaggttttggaaatgtatcggcaacctggctttctggaccagttccctgac
ctcaacagcatgatagaaggcattaggaaagatgctgaccatctgtctgaaaccctgcaa
aagatgtctgagctgcatcaaaagaatcattacattcacctccaagattccctcaacaaa
ataaataactattaccaaataacgttgtcggccggagagaggatcagtggctcaaagtct
gtcctaacacacggaggaaaaaccaggagtaatacatttcgcatgttagatgatttagtt
tcaaaagaaagtgctgcgctggggcagctgaagttgttcaacatttcagatattcaacat
ctaaatgaaaagatatgtgggttaccaggaaacttcccttgtggtgtatcagattgcggt
ggggctttatgccgagatagcaagggaaacagacattgcggcggcccaaactgcaatgga
gcactccctctttctacaaatgctatcagagaaggacgtcagacagtcctgttgttaaat
aacttgaccaaccaaatgcaaggatctgaagagaagattgaaggcataaggaaaatgact
ggggataccaaaaagaaagcctcgctgatggctgaagagctggagaaaaataaagatcaa
atagaaagggaaagagaaagcatcaaattgctcatcaagagattgaagaactttctcgta
gaggagagtgccccaccagaagacatagagaaagttgcaaactacgtcctgggcctccag
ttgccagggtctcccgaagagctaaggatggtgctcgacaaactcaagagcctcatggca
cactgcgaggtctccccgacagaggtgaatgggttaagtgagcaaatggaagaggcacag
ggactattggcgaaagcacaagaagctgagaaagtagcaaaaagtctcccaacacctgat
gaattgataagcagcttgaaagacattgaaaatattcaacggcaaaccagagatgacttt
gcaaagttaaatggaacaatagaagaaaccaaaacaaaaatcgcaaaggctgagaaccac
atggacaagacagatgatgaattagtggacttttcagaaaagcagtcagagctggaagat
gaaatcgcttccttgaagacaaaactgcagatgagcaggggccaagtcaccaatgctaaa
tcagaggctgaaaaagcacagaatcaagctgtagcaactaataaggaatttgctaatctt
aaaaaagaatatgccagtttacaagaaaagctcaaagccaaaggccttcctttggaaacc
ttagagaaactgaatcggttgagaaatgaggctgagaaactggctaaagagactgaaaag
aaaatgaaaagaatagcagatttagaaaataagatacaggagctgaaccggattaaacaa
aacaaggctgatcagctgagacaactggaagatcaagtcacagctatcaaagatgagatt
atgcagcagtcaaataaatacgctatttgcaaaagttaa
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integrated database retrieval system
