Podarcis raffonei (Aeolian wall lizard): 128422288
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Entry
128422288 CDS
T09310
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04510
Focal adhesion
praf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128422288 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128422288 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
128422288
NCBI-ProteinID:
XP_053262094
LinkDB
All DBs
Position
10:complement(10207187..10271983)
Genome browser
AA seq
1795 aa
AA seq
DB search
MHVSWMENGRNCGLDAPPQMHFTSLWTIVVAQEPEFSYGCAEGSCYPATGDLLIGRADKL
TVTSTCGLQKPEPYCIVSHLQEDKKCFTCSSRDPFHETLNPDSHRIENVVTTFAPNRLKL
WWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDC
DTSFPGVYSGPMKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNMLKI
TNLRIKFTKLHTLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVHGYDEEV
EGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNEHSVQCHFDMAV
YMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPEKDIRDPNICEPCNCDPIGSQDGGV
CDRYTDYSTGLIAGQCRCKLYVEGERCDFCKEGFYGLSSDNPLGCLSCECNPLGTIPGGN
PCDSETGSCYCKRLVTGRRCDQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCQ
CRPHMIGRQCNEVEPGYFFISLDHYVYEAEEGIFGPGVSIVERQYSQDRIPSWTGIGFVR
VPEGAFLEFYIDNIPYSMEYEVLIRYEPQLPDQWEKAVITVFRPDKIPTSSRCGNTVPDD
DNQDVSLSPGSRYVVLPHPICFEKGLNYTVRLELPQYSYDTEVENPYTLIDSLVLMPFCK
SLDIFSVGGRGDDVMTNSAWEAFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHETAL
ACQCDPQGSLSSVCDPNGGHCQCRPNVVGRRCDRCAAGTFGFGPSGCKPCECHVQASVNA
FCHPETGQCHCFHGIYGRQCDRCLPGYWGFPSCQPCQCNGHADDCDPYSGQCFNCRDHTS
GHNCERCLGGYYGDPVLGSGDHCRPCPCPDGPESGRQFASGCYQERSTLQVVCVCETGYK
GSRCGECASGFFGNPEDVGGICQPCQCNNNIDSTDPEACDKKTGLCLKCLYHTEGENCQL
CKHGYYGRAVQQDCRKCVCNYLGTVREHCNSTEECQCEKETGQCRCLPNVIGQNCDHCAP
NTWRLASGTGCEPCGCDSERSFGSSCNEFTGQCQCMPGFGGRTCNECQEFFWGDPGVDCQ
ACDCDQRGIQTPQCNRTTGQCICNAGVEGTRCDKCTRGYSGTFPDCAPCHQCFALWDVII
SELTNRTQRFLERAKALKITGLSGPYRQTLSSVEEKLNEIKSIIAQNPAAEPLKNIGNLF
EEAEKLTADVTEKIAEVEVKVSKVASESNTTDTQLSTLEADAKSLDNVVKELAEQLEFIK
ISDVRGALDSITQYFQRSLDAERRANASTLLPGSVVEQSAEMRLEVESLMNETEASFKAK
QEEQSRLLDELAGKLQSLDLAEVSEKTCGTPLGASCADSECGGLSCRTEDGKRKCGGPGC
DGLVTVAHNTWQKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQEVLLKTNATK
EQVDRSNKDLRNLIKQIREFLMKDSADLDSIEAVANEVLNMEMPSTPEQLQTLADNIRER
VESLSDVETVLQQSAGDIARAKTLLDEAKKASKSATDVKVTADMVKEALEEAEKAQDAAE
KAIKLADEDIQGTQDLLTSIESETAASEETLNNATLRIAELEKNVAVLRQKTATNIEDIR
AAEETVATVNQSATDIKRVLDNDVDDKYRTVESLIAKKSSESAAARKKAEALQNEAKTLL
EQANSKLQQLKELENTYEKNQRILEDKAKQVVQLEETVRSLLQAISQKVAVYSTC
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtcgtggatggaaaatggaaggaattgtggtctggatgctccaccacagatg
catttcacaagcctttggaccattgtagtagctcaggaaccagaattcagctacggatgt
gcagaggggagctgctatccagccacaggagacttgctgattggccgggctgacaagcta
acggtcacgtccacatgtgggcttcaaaagcctgaaccatactgcattgtgagccacctc
caggaggataaaaagtgtttcacctgctcttcacgggacccattccatgagacactcaat
cctgacagccatcgtattgaaaatgtggtcactacctttgctccaaaccgtctcaagtta
tggtggcagtcagaaaatggagtagaaaatgtaaccatccagttggatctggaagccgaa
ttccatttcactcatctcattatgaccttcaagacgtttcgcccagctgcaatgctgatt
gaaagatcctcagattttgggaaaacttggcaagtatatagatactttgcctatgactgt
gatacttcattcccaggtgtttacagtggaccaatgaagaaagtagatgacataatttgt
gattcccgttactctgatattgaaccttcaactgagggagaggtaatttatcgtgctctg
gaccctgcttttagaatagaggacccatatagcccaagaattcaaaatatgttaaaaatc
acaaatttaagaatcaaatttaccaaactgcacacactgggagacaaccttctggattcg
agaatggaaatcagagaaaaatattattatgccatttatgacatggtggtccgtggaaat
tgcttctgttatggacatgccagtgagtgcgcaccggtgcatggatatgatgaagaggtg
gaaggaatggtccatggtcactgcatgtgcaggcacaacaccaaaggcctaaactgtgaa
cagtgcttggacttttaccatgacttgccatggcgacctgccgagggtcgcaacagcaat
gcatgcaaaaaatgcaattgcaacgaacactctgtacagtgccactttgacatggccgtg
tacatggcaactggaaataccagcggtggagtgtgtgatgactgtcagcacaacacggtg
gggcgtaattgtgagcagtgcaaacccttctacttccagcatccagagaaagatattcgg
gaccccaacatttgtgaaccatgcaactgtgatccaattggctcccaggatggtggggta
tgtgatcgctatactgactactcaactggccttattgccggacagtgccgttgcaaatta
tacgtggaaggggagcgctgtgatttctgcaaggaaggattctatgggttaagttccgat
aatccacttggttgtctgtcttgtgaatgtaatcctttgggcacaattcctggagggaat
ccttgtgactcagagacaggaagctgctattgtaaacgtcttgttacaggaagacgttgt
gatcaatgtctgcctgagcactggggcttgagcaatgatatggatggttgccgaccgtgt
gattgtgaccaaggaggggcgctgaacaacaactgctcgagtgaatctggtcagtgtcaa
tgcaggcctcatatgattggccgccagtgcaacgaagtggaaccaggatattttttcatt
tctttagatcattatgtctatgaggctgaggaaggcatctttggcccaggagtgagcata
gttgaacgtcagtattcccaggaccgcataccttcatggactggaataggatttgtgaga
gttcctgaaggagcattcctggaattctacatagacaatattccttactctatggagtat
gaagttctgattcgctatgaaccacagttaccagatcaatgggagaaagctgtcatcact
gtatttcgcccagacaagattccaaccagcagcagatgtggcaatacagttcctgatgat
gacaaccaggacgtatcgttatctcctggttcaagatatgtagtccttccacatccaata
tgctttgaaaagggtctgaattacacggttcgtctggagctgccacagtactcctatgat
acggaagtggaaaatccatacacactcatagattctcttgttctcatgcctttttgcaaa
tccctggacatattctcagttggaggcagaggtgatgatgtgatgactaacagtgcctgg
gaagcctttcagagataccggtgcctggagaacagcaggagtgttgttaaaacacccatg
actgatgtttgcaggaatatcatttttagcatctcagccttgctgcatgagacagcatta
gcttgccagtgtgacccacaaggctcattaagttctgtttgtgaccctaatggaggccat
tgccagtgtcggccaaatgttgttggaagaagatgcgacagatgtgctgcaggcactttt
ggattcggacctagtggatgcaaaccttgtgagtgtcatgtccaagcatcagttaatgct
ttctgccacccggagactggtcagtgccactgtttccatggaatatatggccgtcagtgt
gacagatgcttgcctggttactggggatttccaagctgccagccctgccagtgcaatggt
catgcggatgattgtgacccgtacagcggacagtgttttaattgccgtgatcatacctct
ggccacaactgtgaaagatgccttggtggttattatggagatcctgtcctgggatctggg
gatcactgccgtccttgtccttgcccagatgggccagaaagtggccgtcagtttgcctct
ggctgttatcaagaacgttctactctgcaggtggtgtgtgtctgcgagacaggatataaa
gggagcagatgtggcgagtgtgcttctggtttctttggaaaccctgaggatgttggtgga
atttgccagccctgccagtgcaacaacaacattgattcaactgatccggaggcctgcgac
aagaagactggattgtgcctgaagtgcttgtatcacacagagggtgaaaactgccaactg
tgtaaacacggttattatggccgggctgttcagcaggactgtagaaagtgtgtctgcaac
tacctgggaacagtgcgtgagcattgcaacagcactgaagaatgtcagtgtgagaaagaa
actggccaatgccgatgcctccctaatgtgattggacagaactgtgaccactgtgccccc
aatacttggaggttggctagtgggacagggtgtgaaccatgtggctgtgattctgaacgt
tcctttggctcatcttgtaacgagtttactgggcagtgccagtgcatgccaggatttgga
gggcgcacatgcaacgagtgccaggagtttttctggggtgatcctggtgtggactgccaa
gcttgtgactgtgatcaacgtggcatccagaccccacaatgcaaccgcacgactgggcaa
tgcatctgtaacgcaggggttgagggaacccgttgcgataagtgcacccgaggctactcc
ggcaccttcccagactgtgcaccgtgtcaccagtgttttgcgctttgggatgtcatcatt
agcgagctgactaacaggacacagagattcctagaaagagcgaaagccctgaaaatcaca
gggctcagtggtccttaccggcagacactcagctctgtggaggaaaaactgaatgagatt
aaaagtatcattgctcaaaatcctgctgccgagcctcttaagaacattggaaatctattt
gaggaagcagagaagttaacagcagatgttacagaaaagatagctgaagtagaagtaaaa
gtatccaaggtggcctctgaaagcaataccacagacactcaactgagcaccctggaggca
gatgcaaagagcctagacaatgttgtgaaagaacttgcagagcaactagaattcataaaa
atatctgatgttcggggagccttggacagcatcacccagtatttccagaggtccctggat
gctgaaaggagagccaatgcctcaactcttcttcctggtagtgtagtagagcagtcagct
gaaatgcgcctagaggtggagagcttgatgaatgagactgaggccagcttcaaggctaag
caagaagagcagtcacgcctcttggatgaacttgcaggcaaactccaaagtctggatctt
gcagaagtgtctgagaagacgtgcggaactcccctcggggcttcctgtgctgattcagaa
tgtggtggcctgagctgccgcacagaagatggaaaaaggaaatgtggaggaccaggctgt
gatgggttggttactgtggcccacaatacctggcagaaggcgatggatttcgacagagac
atactcagcgctttggcagaagttgaacagctctccagaatggtctcagaggcaaaacag
agagcagacgaagcaaaacagaatgcacaagaggttctcctaaaaaccaacgccaccaaa
gagcaagtggaccggagcaacaaggatctgcggaatcttattaagcaaatcagggaattt
ctgatgaaagacagtgctgatctggacagcattgaggcagttgctaacgaagtgctcaac
atggagatgcccagcacacctgagcagttacaaacacttgcagataatattcgtgaacgg
gtggagagcctttcggatgttgagactgtcctacagcagagtgccggagacatagcaagg
gcaaaaacgctgttagatgaagctaaaaaagccagtaaaagtgcaacagatgtcaaagtc
actgcagacatggtgaaagaagctctggaagaagccgaaaaagcccaagatgcagctgaa
aaggccatcaaactagcagatgaagacatacaaggaacacaagacctacttacctctatt
gaatctgaaactgcagcttcggaagaaactctgaacaacgccactctgcgcattgctgag
ctagagaagaacgtggcagtgcttcgacaaaagactgctacaaacatagaggacattaga
gcagccgaagaaactgttgcgactgtgaatcaaagtgccacagatatcaaaagagtacta
gataacgatgtggacgacaagtataggacagtagaaagcttaattgccaagaaatcaagc
gagtctgcagctgccaggaagaaagcagaggcactacagaatgaagctaaaaccctgcta
gaacaagcaaacagcaaacttcagcagctcaaggaattggaaaacacatatgagaagaat
caaagaattctggaagacaaagccaagcaagtggtgcagctggaagaaacagtccgcagc
ctcttgcaggccatcagccaaaaagttgctgtttacagcacttgctag
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integrated database retrieval system
