Podarcis raffonei (Aeolian wall lizard): 128422394
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Entry
128422394 CDS
T09310
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128422394 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128422394 (HCFC2)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128422394 (HCFC2)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
128422394 (HCFC2)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128422394 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
NANM
Beta-prop_TYW4
Kelch_FKB95
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
128422394
NCBI-ProteinID:
XP_053262323
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All DBs
Position
10:complement(52451574..52472599)
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AA seq
705 aa
AA seq
DB search
MAAGAAALNWRRVSSFTGPVPRSRHGHRAVAIRELVIIFGGGNEGIADELHVYNTATNQW
FLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKMKPQHPS
TGLPPCPRLGHSFSLYGNRCYLFGGLANESEDTNNNIPRYLNDFYELELQHGSGVMGWSI
PVTKGVLPSPRESHTAVIYCRKDSGNPKMFIFGGMSGCRLNDLWELDIETMTWSKPEIKG
TVPLPRSLHTANVIGNKMYIFGGWVPQSTDDNVSSQDEWKCTGSFSYLNLDTTEWIGLIG
DCQEDKNNLLPGPRAGHCGVIVGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEKPPAPS
QVQLIRATTNSFQVKWDEVPTVEGYLLQLNLVMPSPVTAEIPINMASEAPSPSVQGIKLD
LHSQTLNKVPNNVQISISETKVKGPEPENAEKNHSASKESSTSLCLPASTLVKEIAVPPT
SVASVSPNDSAIQLPKTSPPKQNARKQERRWYDVGIFQSNSALVNQFYLLQEEKAIISSK
VDNSDIPNNSLLKKQDLAPGTLYRFRVAAINGCGVGPFSKVSEFKTCIPGFPGAPSIVKI
SKSADCIHLSWEPPVSPSGNILEYSAYLAIRTTQLNENPHQLMFMKIYCGLKTSCTVTAA
QLANAHVDHTSKPAIVFRISAKNERGYGPATQVRWLQETKTSSSK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgccgctgccctcaactggaggcgggtttcttccttcacggggccggtg
ccccgatcccggcacgggcaccgcgccgtggccatccgagagctggtcatcatcttcggc
ggaggcaacgaaggcattgccgacgagctgcacgtgtacaacaccgctacaaaccaatgg
tttcttcctgctgttagaggagatatcccaccaggctgtgcagcccatggttttgtctgt
gatggtaccagaatactagtatttggaggaatggttgaatatggaagatatagtaatgac
ctatatgaattacaggcaagtcgatggctgtggaaaaaaatgaaacctcagcacccatca
acaggcttgccaccttgccctcgccttggccacagcttttccctgtacggcaacaggtgc
tacttatttggtgggttggcaaatgaaagtgaagacacgaacaataacattcccagatat
ttaaatgatttctatgaactggagctacagcatggttcaggtgtcatgggctggagcatt
ccagtgaccaaaggagtgctgccttcaccccgagaatcccacacagctgttatatactgt
agaaaagactcgggaaacccaaagatgtttatttttggagggatgtctggctgtcgactt
aatgacctttgggagcttgacatagaaacaatgacttggtcgaaaccagaaattaaaggg
actgtgccacttccccgtagtctccatacagccaatgtaataggaaacaaaatgtacatt
tttggtggatgggttccacagagcacagatgataatgtgtcttctcaagatgaatggaaa
tgtactggctcattttcttacctaaacttagataccacagaatggataggtctgatagga
gattgccaggaagacaaaaataacctgttgccaggcccaagggctggccactgtggcgtc
atagttggcactcgtctgtatatatggagtggcagagatggatacagaaaagcttggaac
aatcaggtttgctgcaaggatctttggtatctagatactgagaaaccaccagcaccatca
caagtacagctgatcagagctactactaattcattccaagttaaatgggatgaagttcct
actgttgaaggttatcttcttcaattaaatttggtgatgccatcacctgttacagctgaa
atacctattaacatggcatccgaagctccatcaccaagcgtgcaaggaatcaagctggat
cttcacagccaaactctcaataaagtcccaaacaacgtgcaaatttcaatttcagaaact
aaagtaaagggcccggaacctgaaaatgcagagaaaaaccattccgcttccaaagagtcc
agcacctctttatgtttgcctgctagcactttagttaaagagattgctgttcccccgaca
agtgttgcttctgttagtccaaatgattcagctatacaattgcctaaaacttcaccacca
aagcagaatgcaagaaaacaagaacgaaggtggtatgatgttggcatttttcaaagcaac
agtgctctagtgaaccagttctatttgttgcaggaagaaaaggccataatttccagcaag
gtagataattcagatattccaaacaacagtttacttaagaaacaggatcttgctccaggc
actttatacaggttcagggttgcggcaattaacggctgtggcgtagggccattcagtaaa
gtcagcgaatttaagacctgtatcccaggatttcctggagcaccttccattgtcaaaatt
agcaagagtgcagattgtattcacctttcatgggaacctccagtttcgccttcaggaaat
atcttggaatattctgcctacttggctataagaaccacccagctgaatgaaaatcctcat
cagcttatgttcatgaaaatctattgtggccttaagacctcatgtacagtgactgctgcc
caacttgcaaatgcccacgttgatcacacatccaaacctgccatagtttttaggatttca
gccaagaatgaaaggggatatggaccggccacgcaagttcgatggctccaagaaacgaaa
acatcaagttcaaagtag
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