Podarcis raffonei (Aeolian wall lizard): 128423106
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Entry
128423106 CDS
T09310
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128423106 (RNF180)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128423106 (RNF180)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128423106 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
128423106
NCBI-ProteinID:
XP_053263844
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All DBs
Position
11:25910301..25961938
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AA seq
588 aa
AA seq
DB search
MNSQGQGDMLRCWKCRKYVANSDCLINDQTADLVFEEPHASTASQDICNVWHMNIEALPD
WVTRIIENAQWTTGKLNCPFCGARLGGFNFINNTKCSCGQFTNIHLCKRRTDYQTVSSVT
SAISPLKHLSLCKVHSDFNNEIWQSVTGGSLEDRNQRLPCVAKNNNGIGRLMEALCLEVR
STNFEMNSKKIHFKVSNPKTSISASLAVNDKYTVKAFHRKSQSLDMNFREKLVLLPTLYG
TSTAKRPVFSRQHEGQPFYTKGCLQLKSTRTHNFFHFPLKSDAGELPNSFSVTSYGAFAQ
EEAEFNHGLKASKQYLESTTADQQLFLSSSESTTEEDTVQKHITPPALLQPFTTIDQKLS
KRKRNRLNSLRRKKRWPERWPQKQILLPARLWSRSMVSTKAQEPSNYKSQAMNTEEEHEH
WQDKESYLCAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPTSTLCPLCRTAIAQVFFQ
SELNNSTKAHFPIEYSKLKENFQESGLAKWPLPSCRKAFRVIEGFQNTDSFTRRHFPHAA
HRMDYMDFEDDSRGLRFDMDMVIIYIYSINWVIGFIVFCFLCYFFFPF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccaaggtcagggtgacatgcttcgttgctggaagtgtcgaaaatacgtagct
aattctgattgcctcataaacgaccaaactgcagatttggtctttgaagaacctcacgct
tctactgcctctcaggacatctgtaatgtatggcacatgaacatagaagcacttccagat
tgggtgactcgtataatagaaaatgcacagtggacaactggaaagctgaactgccctttc
tgtggggcccgtctggggggttttaatttcatcaataatacaaaatgctcctgtggccaa
tttacaaacatccatctttgcaagaggcgaactgactaccaaacagttagttcagttaca
tcagcaatatcgccactgaagcacttgtctctttgtaaagttcattccgactttaacaac
gaaatatggcagagtgtgacaggtggatctttggaagacagaaatcaaagacttccatgt
gtagccaaaaataacaatggcattggacggttaatggaggcactttgcctagaggtaaga
tcaaccaactttgagatgaacagtaaaaaaatacacttcaaagtgtctaatccaaaaaca
agtatttcagcttcactggctgtgaatgacaaatacactgtaaaagcttttcatagaaaa
tcacagagtttagacatgaacttcagagagaagcttgttttgctgcctactttatatgga
acttccactgctaagagacctgttttctccaggcaacatgaagggcagcctttttacaca
aagggttgcttacaattaaagtccaccagaacacataatttttttcatttcccacttaaa
tcagatgctggtgagcttccaaacagtttttcagttacttcttatggtgcatttgcacaa
gaagaggcagagtttaatcatggtttaaaagcttccaaacagtatcttgagagcactact
gctgaccagcagctgttcctgtcttcatcagagagcactacagaagaagatactgtgcag
aagcacatcacacctcctgctcttcttcagcctttcacaactattgatcaaaagttgagc
aagagaaaaaggaaccgactgaacagtttgaggaggaagaagaggtggccagagaggtgg
cctcagaagcagattctcttaccagcaagactttggtcacggagcatggtttctacaaaa
gcgcaggagccatccaactataaatcacaggctatgaatacagaagaggagcacgaacac
tggcaagataaggaaagctacctctgtgcagtgtgcctggatgtttattttaatccttac
atgtgctatccctgccaccacatcttctgtgaaccttgcctacgcacactcgccaaagat
aatccaaccagcactctgtgtcctctgtgccgcacggcaattgcccaagtttttttccaa
tcagaactgaacaattcaacaaaggctcactttcctattgaatattcaaaattaaaggaa
aactttcaagaatccggtttagcaaaatggcccctccctagttgcaggaaggcattcaga
gttattgaaggttttcaaaacacagattcctttacccgaaggcatttcccacatgctgct
cacagaatggactatatggactttgaggatgatagcagaggattgcgatttgacatggac
atggtgataatctacatttattccatcaactgggttataggattcattgtgttctgcttt
ctctgctattttttctttcccttttaa
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