Podarcis raffonei (Aeolian wall lizard): 128423132
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Entry
128423132 CDS
T09310
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04137
Mitophagy - animal
praf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128423132 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128423132 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128423132 (VCP)
03009 Ribosome biogenesis [BR:
praf03009
]
128423132 (VCP)
04131 Membrane trafficking [BR:
praf04131
]
128423132 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128423132 (VCP)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128423132 (VCP)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128423132 (VCP)
Membrane trafficking [BR:
praf04131
]
SNARE
SNARE associated proteins
Others
128423132 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128423132 (VCP)
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128423132 (VCP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
128423132
NCBI-ProteinID:
XP_053263900
LinkDB
All DBs
Position
11:1048610..1077765
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWQDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGAGGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccgattccaaagctgatgacttgtcaactgcaattctcaagcagaag
aacaggcccaatcggctaattgttgatgaagcaatcaacgaggacaacagtgttgtgtca
ctgtcacaggccaaaatggatgaattgcagctgtttaggggagatacagtcctgctgaaa
gggaagaagaggagagaggcagtgtgcatcgtcctgtctgatgacacctgctctgatgag
aaaatccgcatgaacagggttgttcgcaacaatctgagggtgcgccttggagacgtgatc
agcatccagccttgtccagatgtgaagtatggcaagcgcatccatgtgctgcccattgat
gacacagtggaagggatcacagggaacctgtttgaggtgtacctcaagccatacttcctg
gaagcatacagacccatcagaaaaggggacatcttccttgtgcgcggagggatgcgtgca
gtcgagttcaaagtggtggagacagaccccagcccatactgcatagtagctccagacacc
gtgattcactgtgagggagagcctatcaaacgagaggatgaagaggagtccctgaatgaa
gtgggctatgatgacattggaggctgtcgaaagcagttggctcagatcaaggaaatggtt
gagctgcctctccggcaccctgctctctttaaggctattggtgtgaagcctccccgtgga
atcttgctgtatggtccaccgggtactgggaagaccttgattgcccgagcagtggctaat
gagactggagctttcttcttcctcatcaacgggcctgagattatgagcaagttggcgggt
gagtcggagagcaacctgcggaaggcctttgaggaagcggagaagaatgctccggcaatc
atcttcattgatgagctggatgccattgctccaaaaagagagaagacacatggcgaagta
gaacggcgcattgtgtctcagttgcttacacttatggatggcctgaagcagcgagcacat
gtgattgtaatggctgctaccaacagacccaacagcattgatccagcactccggcgattt
ggtcgctttgatagggaggtggacattggcattcctgatgctactggccgcttggagatc
ttgcagattcacaccaagaacatgaagctggctgatgatgttgatctcgaacaggtggct
aatgagacccatggccatgtgggtgcagacttggctgctttgtgctcagaggcagctctt
caggccatccggaagaagatggatctcattgaccttgaggatgagaccattgatgctgaa
gtgatgaactcgttggctgtgaccatggatgacttcaggtgggcccttagccagagcaac
ccctcagccctgcgcgagacggtggtagaagtgccacaagttacttggcaagacattgga
ggcttggaagacgtcaagcgagaactgcaggagcttgtacagtatccagtagagcatcct
gacaaattccttaagtttggcatgaccccctccaaaggggtgttgttctatgggcctcct
ggctgtggaaagaccctgctggccaaagccattgccaacgaatgccaggccaacttcatt
tctatcaagggtccagaactgctcaccatgtggtttggagagtccgaggccaacgtgcgg
gagatctttgacaaggcccgccaagcagctccctgtgtgctgttctttgatgagctggac
tccattgcaaaggcccgtggtgggaacataggggacggtggcggcgccgcagacagagtc
atcaaccagatcctaacagagatggacggcatgtcaaccaaaaagaacgttttcatcatt
ggcgccactaaccggccggacatcattgatcccgccatcctgcgccctgggcgcctggac
cagctgatctacatcccactgcctgatgagaagtctcgcgtggccattctcaaggccaac
ctgaggaaatcgcctgtggccaaggacgtggacctggattttctggctaagatgaccaat
ggcttttcaggagccgatttaaccgaaatttgccagcgggcctgtaagctggccatccgg
gagtcgattgagaatgagatcaggcgggagagggagaggcagaccaacccttctgccatg
gaagtggaggaggatgacccagtccctgagatccggcgtgatcactttgaggaggccatg
cgcttcgcccgccgctcagtcagcgacaacgatatccgcaaatatgagatgtttgcacag
acccttcagcagagccgcggctttggtagcttcagattcccatcaggtaaccagggtggt
gccggacccagccagggcaccggaggcgccggtggtgggaacgtatacagtgaagacaac
gatgacgacctctatggttaa
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