Podarcis raffonei (Aeolian wall lizard): 128423312
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Entry
128423312 CDS
T09310
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04068
FoxO signaling pathway
praf04110
Cell cycle
praf04120
Ubiquitin mediated proteolysis
praf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128423312 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128423312 (SKP2)
04150 mTOR signaling pathway
128423312 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128423312 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128423312 (SKP2)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128423312 (SKP2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_Zer-1
LRR_8
LRR_R13L1-DRL21
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128423312
NCBI-ProteinID:
XP_053264295
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Position
11:17274792..17286782
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AA seq
416 aa
AA seq
DB search
MHRRHLQEIPDSGSNVSAGFTWGWDPSKTSELLSGMGVSVLKDKLGNENTPQELLMCMGP
PAKRQKVKEKEFTIARRPRLLREAGAGVSWDSLPDELLLGIFSYLSLTDLLKVPQVCRRW
HRLSIDESLWQTLDLAGKNLRPGVIGHLLPLGITAFRCPRSCVGNPLFKTSRPLRVQHLD
LSNCTIKVGDLQSILCRCQELQNLSLEGLELSDDIIKNIAHNPCLVRLNLSGCSGFSAEA
LETMLDSCPRLEELNLAWCDFTVDHVKAAVSHISPTVTQLNLSGYRQNLLMPDIKTLTER
CSSLVHLDLSDSVMLKPDCFQYFHHLASLEHLGLSRCYQIPPAALLELGDIATLKTLQVF
GIVTASSLQLLKATLPRLKINVSHFTPIARPTVGCKRNEQIWGIQCRLSLKSPAGF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggagacatctccaggaaattccagattcaggcagcaacgtcagcgctggtttc
acatggggatgggatcccagcaagacttcggagctgctctcgggcatgggagtgtctgtt
cttaaggataagctaggcaacgagaacaccccccaggaactgctcatgtgcatgggacca
cccgcaaaacggcagaaagtgaaggaaaaggaatttactattgcccgcagacctaggctg
cttcgagaggcaggagcaggagtctcttgggattcattgcctgatgaactgcttctggga
attttctcctatctgtccttgactgatctgctgaaagttccacaggtttgccggaggtgg
catcgcctttcgattgacgagtcactctggcagactcttgacctcgcaggaaagaatctg
cggccaggtgtgattggccatctgctgccattgggtataactgccttccgttgtccaagg
tcctgtgttggcaaccctttgttcaaaacaagcagacctcttcgggtacagcatctagac
ctgtcgaattgtacaataaaagttggagatctccaaagtattctgtgcaggtgccaggag
ctacagaacctcagcttggaaggccttgagctttctgatgatataattaaaaatatagca
cacaacccctgtttggtgcgactaaacctgtctggatgctctgggttctctgcagaagcc
ttggagacaatgctggacagttgccccaggttggaagagctgaacttggcctggtgtgac
ttcacagttgatcacgtgaaagcagcagtcagccacatttctccaacggtaacacagctg
aacctcagtggatacagacagaatctattaatgccagatatcaaaacattaactgagagg
tgttccagtctagtccatttagatttaagtgacagtgttatgttgaagcccgattgcttc
cagtatttccaccatctggcgtctcttgaacacctgggtcttagtcgatgctatcagata
cctcctgcagccctacttgaacttggtgacatagccacactcaaaacactccaggttttt
ggaatagtgactgccagctcccttcaactcttgaaggcaacacttcctcgcctaaagatc
aacgtctcccattttacacctattgcaaggcccactgttggctgtaaaaggaacgaacag
atttggggaatccaatgcagactgagcttgaaaagtccagctggtttttaa
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