Podarcis raffonei (Aeolian wall lizard): 128423348
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Entry
128423348 CDS
T09310
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128423348 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128423348 (NIPBL)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
128423348 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
128423348
NCBI-ProteinID:
XP_053264399
LinkDB
All DBs
Position
11:17541882..17664326
Genome browser
AA seq
2771 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMPQYKLSQNSMHGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMAPQNSPVPSPYA
PQSPAGYLPYSHPPSYTPHPQIQQASVSSPIGMRNIHENKVTSQLSGNSANHHADNSRHG
SSEDYLQMVHRISSEEGDSSVRNTASFSLRSPQSVCSPAGSDGTPKGSRPPLILQSQPPP
YSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTLRLT
RVRSSDMDQQDDMLSGLENSNVSEGDISFNVQYPGQTSKTPVTPQDINRPLNAAQCLPQH
EQTAFLQAQQVPVLQPNTSVSAKQPQNPLVQTHQQVSQHGTITPYDEVELDALAEIERIE
RESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNKPASQETGSAGNGSRPALMV
SIDLQQAGRADSQATATQDSDIIKKPEEIKQCNDGSVFVPQEDVIGVLKLKSENHPDIPR
KKSDSEGVKVEIQHNENKQAEVQQNESKRIETKHTESKQAEIKHESKHESRQVDVKPNES
KQNNGKQEIRQRPETPKQKNEVRPDTPKQKNEGRPETPKQKNEGKPETPKHRHENRRDSG
KSSSEKKPDISKYKMDMKSDPSRVKSERPDALKQRTDGRSVSDSLRRDHDNLKQKSEDRG
ESERHRGDSSKLRRPEYLRSSSKGDHDSKYIIKSDNTKPEKLDRKHRHESGESRDRLSSG
DQRPRPDSPRIKQESKSDIGKLRPDRPGFKSHNSKDERRTDGNKSKMDSNKAHTDNKAEF
PSYLLGGRSGALKHFIIPKIKRDKDGNVMHEARKSEIKGEPKDKVEKIGLVEDLNKGAKP
VVVLQKLSLDDVQKIIKDREDKSRSSCFKPNKNKSSRSNKGSIDQSVLKELPPELLAEIE
STMPLCERVKMNKRKRSTVNEKPKYAEISSDDDNDSEVAFETSRKRHKKDREDDKAWQYE
EHDRRASGEHKRSSHYHEGRRSSGSSRYRNRSPEDSDVDDYSPPPSLSEVARKMKKREKQ
KKRKAYEPKLTPEEMMDSSTFKRFSASVENILDNLEDMDYTAFGDDDEIPQEFLLGKHQL
SELGSESAKIKAMGIMDRLSTEKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEERLWRD
LIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRL
DPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKICDIVSSLAELLEIQLLTDTTILQVSSMG
ITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSS
DTDGEPMYIQMVTALVLQLIQCVVHLPSGEKDSNSEEESNKKVDQDVLITNSYETAMRTA
QNFLSIFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSN
KSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGDDEIQQLQKALLDY
LEENTETDASLVFSRKFYIAQWFRDTTMETEKAMKTQKDDDSSEGTHHAKEIETTGQIMH
RAESRKKFLRNIIKTAPSQFSTLRMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQIL
RVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRF
VLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVND
EEGIKKLVNETFQKLWFTPTPHNDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKS
EEDASYKPVKKACTQLVDNLVEHILKYEESLADSDNKGVNSSCLVACITTLFLFSKIRPQ
LMVKHAMTMQPYLTTKCSSQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLII
KYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKP
ALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGF
AFIQHPGLMFEQEVKTLYNSILSDKNSSVNLKIQVLKNLQTYLQEEDTRMQQADREWKKV
AKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQ
CVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCRKDP
VRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNQLLYIADNLACF
PYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKYKKERKPSSDEESESESNSESDSD
SEEEVHKPRKLRKRAESDSDTDEENDINAVMKCLPDNSAPLIEFANVSQGILLLLMLKQH
LKNLCGFSDSKIQKYSPSESAKVYDKTINRKAGIHFHPKQTLDFLRSDMAHSKLTDEVKR
NIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETEDDESD
GEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSN
GFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQTLR
SLYAAKDGTSS
NT seq
8316 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtctcaca
gaccttttgaaccagcttcctcttccatcacctttacctgctacaactacaaaaagcttg
ctctttaatggacgaattgcagaagaggtgaactgccttttggcctgtagagatgaaaat
ctggtttcacagcttgtgcacagcctcaaccaagtttcaacagatcatatagaactgaaa
gataaccttggcagcgatgatccagaaggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagt
ggaatgatgatgccgcagtacaaactgtctcagaattccatgcatggtagtcctgcatct
tccaattatcagcaaaccactatctctcatagcccttccagtcgatttgtgccaccacaa
acaagctctggtaatagatttatggcaccacaaaacagccctgtgcctagtccatatgct
cctcaaagccctgcaggatatttgccatattcacaccctccaagttacacgcctcacccg
cagatacagcaagcttcagtatccagtcccattgggatgaggaatatacatgaaaataaa
gttacaagtcagttgtcaggcaattcagctaatcaccatgctgataattctagacatggc
tcaagtgaagactacctgcaaatggtgcacagaataagcagtgaagagggtgattcttca
gtaaggaacactgcatcgttttccttgagatcaccacagtccgtatgttctcctgctgga
agtgatggaacccctaaaggatcaagaccacctttaatacttcagtctcagcctccacct
tactcatcacctagagatgttcccccagacatattattagattctcctgaaagaaagcaa
aagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaaaaagctgca
atgtatgatatcattagctctccatctaaggactctactaaacttacgttaagacttact
cgtgtaagatcttcagatatggaccagcaggatgatatgctttctggtttggaaaacagt
aacgtgtcagaaggggacatttcctttaatgtgcagtatccaggacagacttctaaaaca
ccagttactccacaggatattaatcgcccattaaatgctgctcagtgtttgccgcagcat
gaacaaacagcattccttcaggcacaacaagtgcctgttttacaaccgaacacttcagtt
tctgcaaaacaacctcaaaatcctttggtacagacgcatcaacaggtttcacaacatgga
actatcacgccatatgatgaagtagaattggatgcattggctgaaattgaacggatagaa
cgggaatcagctattgaaagggaacggttttcaaaagaagtgcaagacaaagataagcct
ttgaagaaacgaaaacaagattcctatccacaggaggctggaggtgctactggaggaaat
aaaccagcttctcaggagacaggttctgcaggaaatgggtcgaggccagccttgatggtt
agtattgatctacaacaagcaggacgggcggactctcaggcaactgctactcaggactct
gacatcatcaaaaagcctgaagagataaagcagtgtaacgatggttctgtttttgttcct
caagaggatgttattggagtacttaaactaaagtctgaaaaccaccctgacatccctagg
aaaaagtcagattccgaaggtgtaaaggtggaaatacaacacaatgaaaacaaacaagca
gaagtgcagcaaaatgagagtaaacggatagaaactaaacacactgaaagcaagcaggca
gaaattaaacatgagagcaaacatgagagtagacaggtggatgtgaaaccaaatgagagc
aagcagaataatggcaaacaggaaataaggcaacgacctgagactccaaaacagaaaaat
gaagtgaggccagatactccaaaacagaaaaatgaaggcaggccagaaaccccaaagcag
aagaatgaaggcaagccagaaacccccaaacacagacatgaaaacaggcgggattctggt
aaatcatcttcagaaaagaagcctgatatatctaaatataaaatggacatgaaatccgat
ccttccagagtgaaatctgaaaggcctgatgcattaaaacagaggacagatggacgttca
gtttctgactctctaagacgggatcatgataaccttaaacaaaaatctgaggacaggggt
gaatcagaaagacacagaggagattcatccaagctgagaagacctgagtatttgaggtct
tcaagtaagggcgatcatgactctaaatatatcattaaatctgataacacaaaacctgaa
aaactagacagaaaacacaggcatgagtctggtgagtcccgggataggctgtcatctggg
gatcagagaccaagacctgacagccctcgtattaaacaagaaagtaaaagtgatattggt
aaattaaggccagatagaccgggttttaaatcacacaacagtaaagatgaacgaaggaca
gatggtaataagagcaaaatggatagtaacaaagcacacacagacaataaagcggaattt
cccagttatttgttggggggaagatcgggggctttgaaacactttatcattccaaaaatc
aaacgtgataaagatggtaatgtcatgcacgaagcaaggaaatcagaaattaagggtgaa
ccgaaggacaaagttgagaagattgggcttgtggaggatctaaataaaggagctaaacca
gttgttgttctgcagaagctttctttggatgatgtacaaaaaattattaaggacagagaa
gacaaatctagaagctcttgttttaaacctaacaagaacaagtcatccagatcaaacaaa
ggtagcatagatcagtcagtgttaaaggaattacctccagaactcctagcagaaattgaa
tctaccatgcctctctgtgaacgagtgaaaatgaacaaacgtaagcgtagcacagtaaat
gaaaaaccaaaatacgctgaaatcagttctgatgatgacaatgacagtgaagtggctttt
gaaacttctcggaaaaggcataaaaaggatagagaggatgataaagcttggcaatatgaa
gaacatgacagacgagcttctggagaacataaaaggagtagccactatcatgaaggaagg
aggagctctggtagcagtcgatatcgcaatcgtagtccagaagactcagatgtagatgat
tattctccccctcctagcctcagtgaggtggctagaaaaatgaagaaaagagagaaacaa
aagaagaggaaagcttatgaaccaaaactaacaccagaagaaatgatggattcgtctacc
ttcaagaggttcagtgcttcagtagaaaatattttggacaatttggaagacatggattat
actgcatttggtgatgatgatgaaattcctcaggagtttttattgggaaagcatcaactt
agtgaattgggcagtgaatctgctaaaattaaggcaatgggcattatggacaggctttca
acagaaaaaacagtgaaagtcctgaacatattggagaagaatattcaagatggttcaaag
ctttctactcttcttaaccataataacgacactgaagatgaggaaagattatggagagac
ttgatcatggagagagtcacaaaatctgcagatgcctgtcttacagctatcaacattatg
acatcacccaacatgcccaaagctgtatatattgaagatgtaatagaaagagttattcag
tacactaaatttcacttacagaacacactttatcctcagtatgatcctgtttaccgattg
gaccctcatggtggtggtgtattaagctcaaaagcaaagcgtgccaagtgttctacccat
aagcaaagagtaatcgtgatgttatacaacaaaatttgtgatattgttagcagtttggct
gaactgttggagatacagcttcttactgacaccactattcttcaggtttcttcaatgggg
ataacacctttttttgtagaaaatgtcagtgaacttcagttatgcgccatcaaacttgtc
actgcagtcttctcaagatatgaaaagcataggcaattgatattagaagaaattttcact
tcacttgcaaggttaccaaccagcaaaagaagtctgaggaacttcagactgaacagcagt
gacactgatggtgaacctatgtatattcaaatggtgactgcactggtgctacaactaatt
cagtgtgttgtgcatctaccatcaggcgagaaggactctaattctgaagaggagtcaaat
aagaaggtggaccaggatgtcctcattacaaactcatatgaaacagccatgagaacagca
caaaacttcctttccatttttctcaagaaatgtggtagcaagcaaggggaagaagattat
aggccactctttgagaactttgttcaggatctcctttccacggtcaacaaaccagaatgg
ccagctgcggagttactacttagtctattgggaagattgttggtccatcaatttagtaat
aaatctacagagatggctttgagggtggcatcactcgactatcttggtaccgtagcagca
cggctgcggaaggatgcagtcactagcaaaatggatcaaggatctatagctcgaatttta
aaacaggtctcagggggggatgatgaaatccaacaactgcaaaaggcactgttagattat
ttggaagaaaatacagaaacggatgcatcactagtgttttctcggaaattttatatagca
cagtggtttcgggacactactatggagactgagaaagcaatgaaaactcagaaggatgat
gattcatctgaaggaacacaccatgcaaaagaaatcgagacaacgggacaaatcatgcac
agagcagaaagtcgcaaaaaatttcttcgcaacatcattaaaacggcaccttctcagttc
agtacattaaggatgaattctgatactgtggactatgaagatgcttgcttgattgttcgc
tacttggcctctatgaggccgtttgcccagagcttcgatatttatttgacacagattctg
cgtgtgcttggtgaaaatgcaattgctgttcgaacaaaagccatgaagtgtttgtctgag
gttgttgctgtagatcccagcattctagccaggcttgacatgcaacgtggtgtccatgga
cggttgatggacaattccactagtgtacgagaagcagccgtggaattacttggtcggttt
gtgctttgtcgaccacagcttgctgaacagtattatgacatgctgattgagcgaatactg
gatactggtattagtgtcaggaaaagagtcataaagattcttagggatatctgcattgaa
caaccaacatttcccaaaattacagaaatgtgtgtgaaaatgattcgcagagtcaacgat
gaagaaggcattaagaaactggtaaatgagacattccagaagctgtggtttactccaact
ccccataatgacaaagaagcaatgaccaggaaaatattgaacattacagatgtggttgca
gcttgtagagatacagggtatgattggtttgaacagcttcttcaaaatttgctaaaatct
gaagaagatgcttcatataagcctgtaaagaaagcctgtactcagcttgtggataatttg
gttgaacacattctgaagtatgaagaatctctggcagattctgacaataagggtgtgaat
tcaagttgcttggtagcctgcataaccactttgttcttattcagcaaaatcaggccccag
ttaatggtcaaacatgccatgaccatgcagccatatcttaccactaaatgcagtagtcaa
aatgatttcatggtgatctgcaacgttgcaaaaattttagaattagtagtgccactgatg
gaacatccgagtgagactttccttgctactattgaagaagatctcatgaagcttataatc
aaatatggcatgacagtagtgcaacactgtgtcagctgtcttggggctgttgtaaacaag
gtcactcagaattacaaatttgtatgggcctgctttaatagatactatggtgcactttca
aaattaaaaagtcaacatcaagaagacccaaacagcactatacttacagcaaataaacca
gcactccttagatcccttttcactgttggtgcactgtgtcggcattttgattttgatcaa
gaagattttaaaggcaacagcaaggttaacattaaggataaagtacttgagctgctgatg
tattttaccaaacattcagatgaggaggtacaaacaaaagccattattggtctagggttt
gcattcatacaacacccaggtctaatgtttgaacaagaagtgaaaacattatacaacagc
atactctctgataagaacagctcagtaaacttaaaaatccaggtgttaaaaaatctccaa
acatacctccaagaggaagatacacggatgcagcaggcagatagagaatggaaaaaggta
gcaaagcaggaagatctgaaagaaatgggtgatatttcctcagggatgagcagctctatc
atgcagctctatctcaaacaggtccttgaggcattctttcacacgcagtccagcgttcgt
catttcgcactcaatgttattgcactgacattaaaccagggtcttatccatccagttcag
tgtgtgccatacttaatagctatgggcacagatccagagccttctatgaggaacaaagca
gaccagcagctggtggagattgacaaaaaatatgctggatttattcatatgaaagcagtg
gctggtatgaagatgtcataccaggtgcagcaagcaatcaacacttgccgtaaagatcct
gtgaggggttttaggcatgatgaatccagcagtgctttgtgctcacacctttactccatg
atccgaggaaaccgacaacaccgacgagcctttctcatttccttactcaacctctttgat
gacacagctaaaacggaggtgaatcagcttttgtacatagcagacaatctagcctgtttt
ccttaccaaacccaggaagagccactttttataatgcaccatatagacatcacattatca
gtttctggtagtaaccttctccagtcatttaaggagtctatggtgaaatataaaaaagaa
aggaagccatcatctgatgaagagagtgagagtgaaagtaacagtgaaagtgacagcgac
agtgaggaggaagttcacaaaccccgaaagttgcgaaaacgtgcagagtctgattcagat
actgatgaagagaatgatataaatgctgtcatgaaatgtttgccagacaattcagctcct
ctcattgaatttgcaaatgtttcccagggcatattgttgctgttgatgttaaaacagcat
ttgaagaacctctgtggattttctgacagtaaaattcagaaatactctccctctgaatcg
gcaaaagtatacgataaaacaataaacaggaaggcaggaattcatttccatccaaaacag
acgctagacttccttcgaagtgatatggctcattccaagctcacagatgaagtgaagagg
aatatagtcaaacagtacttagatttcaaacttctcatggaacacttggatcctgatgaa
gaagaggaagatggagaagtgtcagctagcacaaatgctcgcaacaaagctattacctcg
ctgctcggaggaggcagccctaaaaacaatgcagctgagacagaggatgatgagagtgat
ggggaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagac
tctacggagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatt
tgctgtccaaagtacaaagatcgaccacaaattgcaagagtagtacagaaaaccagcaat
ggcttcagtgttcagtggatggcaggctcctacagtggctcctggactgaggctaagcgc
cgtgatggccgcaaactggtgccttgggtagacactattaaagagtcagacattatttac
aaaaaaattgctctaacgagtgctaataagctgactaataaagtggttcagactttacga
tcgttgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system