Podarcis raffonei (Aeolian wall lizard): 128423915
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Entry
128423915 CDS
T09310
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128423915 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128423915 (ABCB1)
Enzymes [BR:
praf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
128423915 (ABCB1)
Transporters [BR:
praf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
128423915 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_16
AAA_5
Rad17
AAA_29
Zeta_toxin
G-alpha
AAA_28
AAA_30
DUF815
nSTAND1
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
128423915
NCBI-ProteinID:
XP_053265497
LinkDB
All DBs
Position
12:complement(25388991..25445191)
Genome browser
AA seq
1286 aa
AA seq
DB search
MASESQAKANMDGKLEEMAERNNASQDERKSSKEKPSKEKPKKVSPFTMFRYADCLDKLL
MILGTVMSALHGASLPLMMIVFGDMTDSFVNAAKYFPTSNESLVNVSLPNISETLQQQMT
RHSYYYSGIGAAVLIAAYAHIACWTLAAGRQIKRIRQHFFHAVMRQEIGWFDVNDVGELN
TRLIDDVSKINEGIGDKMSMLIQGVATFLTGFIVGFAKGWKLTLVILAVSPVLGLSAAIW
AKVLTAFTNKELAAYAKAGSVAEEVLSSIKTVMAFGGQKKEIERYHKNLEDAKRLGIKKA
VTANMSMGIAFLLIYAAYALAFWYGTTLILDEGYSIGKVLTVFFAVLIGAFSIGQVTPNL
EAFAIARGAAYAIFNIIDNEPKIDSYSPAGYKPDQIKGNLAFQNVHFKYPSRPDVQVLKG
LNLKVNSGQTVALVGSSGCGKSTTVQLIQRFYDPIEGMITIDDQDIKTLNLRYLREIIGV
VNQEPVLFQTTIAENIRYGHEDVTMEEIEKAVKEANAYDFIMKLPNTFHTMVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTV
RNADLIAAFEDGSITEQGTHNELMAKKGVYFKLVNMQSIETEVHSDENELIDGKGMSKEA
LKDFFANGVRRRSTRKSLKRPEEQDKDLEVQTVQPNESLPSVSFLKIMKLNVSEWPYFLV
GTFSAIINGALQPAFSVIFSEIIGIFTLNDPVIVREKSNMYSLLFLALGVISLVTFFLQG
FTFGRAGEILTLKLRYMGFQAMLRQDIAWFDDPKNNTGALTTRLALDASEVKGATGARLG
MLAQNIANLGTGIIISLVYGWQLTLVILAVVPLVAIGGLIEMRMLAGHARKDKKELEGAG
KIATEAIGNIRTVVSLTQEIKFEQKYGDSLQGPYRNSLKKAHIHGLTYGVSQGIMYFTYA
ACFQFGAFLVEGGYMDSKNVFLVFSCIVFGAMALGQTASFTPDYAKAKISAAHMFQLFET
VPLIDNYSVEGHKPDDFGGNVAFKQVAFNYPTRPDVSVLQGLSVAVEKGQTLALVGSSGC
GKSTLVQLLERFYDPLSGEVLLDGNGATQLNVQWLRSQIGIVSQEPVLFDCTIAENIAYG
DNSRKVSFDEIVEVAKAANIHAFIDSLPDKYNTPVGDKGTQLSGGQKQRIAIARALIRQP
RILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTVQNADSIAVIQNGKVKEQ
GTHQQLLAAKGLYYTLVNVQAGSAPA
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagagagccaagcaaaggcaaacatggacggaaaacttgaagagatggctgaa
agaaataatgcttcccaagatgaaaggaaaagcagtaaagaaaagccaagcaaagagaag
cctaagaaggtcagcccatttacaatgtttcgttacgctgactgcttggataagttgctg
atgatattaggcaccgtcatgtcagcccttcatggagcctcccttcctctcatgatgatt
gttttcggagacatgacagacagctttgttaatgcagcaaaatatttccctacaagtaat
gaatctttagttaatgtatctctccctaatatttctgaaaccctgcaacagcaaatgaca
agacattcatactattactcaggaataggagctgctgtccttattgctgcctatgctcac
attgcatgctggacactggcagccggccgccagatcaagagaattaggcaacactttttc
catgctgtcatgcggcaagaaattggatggttcgatgtaaatgatgttggggaattgaat
actcgtcttatagacgatgtctccaagatcaacgaaggaattggtgacaaaatgtcaatg
ctcatccagggagtagctacatttctaacaggatttatagtcgggtttgctaaagggtgg
aaattgactcttgtaatacttgcggtcagtcctgttctggggctctcagctgcaatctgg
gcaaaggtccttactgcattcaccaacaaggagcttgctgcatatgcaaaagctggatct
gtcgctgaggaggttctctcatcaattaagacggtgatggcttttggaggacagaagaaa
gaaattgagagatatcataaaaatttagaagatgctaaaagacttggaattaaaaaggct
gtgactgccaatatgtccatggggattgctttcttattaatatatgctgcatatgctttg
gctttctggtatggaactactttgatactggatgaaggttacagcattgggaaagtcctg
acagtcttcttcgctgttctgattggcgccttttccatcggtcaggtgactccaaaccta
gaagcgtttgctattgcaaggggagcagcttatgcaatattcaacatcatagacaatgaa
cctaaaattgacagttattcaccagctggctacaaacccgaccaaattaaaggaaacctg
gctttccaaaatgtgcatttcaagtatccctcaaggccagatgttcaggtgttaaaaggc
ttgaatctgaaagttaacagtggacagacagtggccttggtaggcagtagcggttgtggg
aaaagtacgactgttcagctgatccagaggttttatgatcctattgaaggcatgattacc
attgatgatcaggatatcaagaccctgaacttaaggtacctgagggagattataggtgtg
gtgaaccaggagcctgtgttatttcaaaccacgattgcagaaaacattcgatacggccat
gaagacgtcaccatggaagagattgaaaaagctgtcaaggaagccaatgcttatgacttc
atcatgaaactgcccaatacatttcacactatggttggagaaagaggagcccagctaagt
ggaggacagaagcaaaggatagcaattgcccgtgctcttgtccgcaaccccaagatcctg
ttgctggatgaggcaacgtcagctttggataccgaaagtgaagctgtggttcaggcagca
ttggacaaggcaagggaaggtcgcacaactattgtaatcgctcatcggttatctacagtc
cgcaacgcagacctcatagctgcttttgaagatggctccatcacagagcaagggacacat
aatgagctcatggcaaagaaaggagtttatttcaaacttgttaatatgcagtcaattgaa
actgaggttcattcagatgaaaatgagctcattgacggaaaaggcatgtcaaaagaggca
ttaaaagacttctttgcaaatggagtgcgacggcgttcgacccgcaagagcttgaaaagg
ccagaagagcaggacaaagaccttgaggtccaaactgttcagcctaatgaaagtttgccc
tcagtttcatttctgaagatcatgaagttgaatgtgtctgaatggccttactttttggtg
ggaacgttttctgcaatcatcaatggagcgttgcagcctgcgttttcagtcatattctct
gaaatcatagggatttttacactgaatgatccagtcatagtgcgagaaaagagcaatatg
tattcattgctattcttagcccttggggttatatccttggtaacatttttccttcagggt
ttcacctttggcagagctggagagatccttacattgaagcttcgctacatgggattccaa
gcaatgcttagacaggacattgcttggtttgatgaccctaaaaacaatactggagcgttg
actacaagacttgctcttgatgcttctgaagtaaaaggtgctacaggggccaggctaggt
atgcttgcccaaaacattgctaacctcgggacaggaataattatatcattggtgtatggc
tggcagttgacccttgtcatcttggctgttgtgccactcgttgccattggaggactcatt
gaaatgagaatgttggctggacatgccaggaaagataagaaggaacttgaaggtgcaggg
aagattgcaacagaagcaatagggaatatccgaacagttgtttcccttactcaggaaata
aaatttgaacaaaagtatggagacagtctgcaaggaccatacaggaattccttaaagaaa
gcgcatatccacggactaacttacggcgtttcccaaggcataatgtacttcacctacgcc
gcttgttttcaatttggtgccttccttgtggaagggggatacatggattctaagaacgtt
ttcttggtattctcatgcattgtcttcggtgccatggcgctaggacagacagcttcattt
acaccagactatgccaaagcgaagatatctgcagctcacatgttccagctgtttgagact
gtacccttaatagacaattacagtgttgaaggacacaagcctgacgactttggcggcaat
gtcgcatttaagcaagtagccttcaactatcctacccggcctgatgtctcggtactccaa
ggactgagtgtggcagtagagaaggggcagaccttggctcttgtaggaagcagcggctgt
ggaaagagcactctggtccagttacttgaaagattctacgaccccctcagtggagaagtg
ctactggatggcaatggtgcaacacagttaaatgtccagtggctgcgatcccagattgga
attgtctcccaagaaccggtcctgtttgactgcactattgcagagaacattgcatatgga
gataacagcagaaaggtgtcctttgatgagatcgttgaagtagccaaagcagccaacatc
catgccttcattgacagcttaccagataaatacaacactcctgtaggtgacaaagggact
cagctctctgggggtcaaaaacagcgcattgctattgctcgtgctctcatccgccagcca
agaattctgctactggatgaagcaacctctgcacttgatactgaaagtgaaaaggttgtc
caagaggctctggataaagcaagggaaggccgcacctgcatcgtaatagctcaccgctta
tcaacagtgcagaacgcggacagtatagcagtgatccagaacgggaaagtcaaagaacaa
ggaacacatcaacagctactggctgcaaaaggactctattacactctagtcaatgttcaa
gcaggatcagcccctgcataa
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integrated database retrieval system
