Podarcis raffonei (Aeolian wall lizard): 128423920
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Entry
128423920 CDS
T09310
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128423920
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128423920
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
128423920
NCBI-ProteinID:
XP_053265507
LinkDB
All DBs
Position
12:9655802..9698674
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AA seq
1846 aa
AA seq
DB search
MFIMVTIFTNCVFMALADVQSNSSETSSTKYVEYTFTAIYSFECLIKILARGFCLNEFTF
LRDPWNWLDFSVIVMALLGEFIDMGGVSVLRMFRVLRALKTVSIIPGLKVIVGALIQSVK
KLADVMILTVFCLSVFALIGLQLFKGHLRHKCVKNYTEYISQSISNETSFSSKQNLTPYE
NFTNSPVNYIHKNGTEDYLLCSNASDGGSCPPKYVCLKVGENPDFGYTSFDTFGWAFLSL
FRLMTQDYWERLYQQTLRASGKIYMLFFMLVIFLGSFYLVNLILAVVTMAYEEQSTATIA
ETEAKERKFREAMEMLKKEQEELAAKENDSMSHSSFEVSPIGSKEVKERSNRMKKLSLGM
EDYGEDPKTPKSQSSDSYRKPSLISHNYGPSSNPTRRRPSHGSVFNFHVSGRDAGSRAEF
GEDESSSIGETEIQHSTLLAARMGRRPSIQSQTSYSPRLTAPNYMQPGKWAAGDDCNGMV
SLMGGSGTRPFNMDPISNEGSLLPPVMENPGKGDLTTSCDEANKRFQTQRLSVDYYNHPL
QRQRAASAVSIITSALEELEESNQKCPRFLKNLAAKYLVWNFCPLWLKIKKNVGVFVMDP
FTDLTITVCIVMNTLFMALEHYKMSPDFEAMLGIGNKIFTGIFTAEVILKIIALDPYYYF
QQRSNIFDSVIVFISIIELSSEPKENKASGKKGSRKGNFTVLRTLRLMRVFKLAKSWPTL
NTLIKIILNSVDALGNLTLVLAIIVFIFAVFGMQLFGGNYKTHCKKLADDCKLRWHMQDF
FHSFLVIFRILCGEWIETMWGCMVVNEQSMCLLVFLLVMVIGNLVVLNLFIALLLNSFST
DNLLQLPEDDRETNNLKIAFARIHRGLHAAKQAMLAFCFKALGYKRKAAKKKIKCESEKN
GLELRKDLPNFKESHGNREIEKNGERCSVHIPDDFISNPNVFVCVPIAAPESDSEGSEDA
DEKQGAAMETEYTEKENQLRLRGERSKSSDAWSRTSEISSPGETSMHWKAGSSSPKEKER
ADIISCSEGSTVDLANSEEFLKQIPELAEDSEPDNCFPEKFAQRYPWCMVNTEKFPGRLW
WNLRKTCYRIVEHNWFESFIVFMILLSSGALVSLVTLVATLAGQSDMGPIKSLRTLRALR
PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIVGVNLFAGKFGKCVNMTDE
DGSVNETIITNFSDCKEHNRTDGILYWITVKVNFDNVGSGYLALLQVATFKGWMDIMYAA
ADSTDVEYQPKWEANKYMYIYFVVFIICGSFFTLNLFVGVIIDNFNQQKKKFGGEDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPLNTYQGFLFDIVTRQAFDVAIMALICLNMVTMMVE
SDDQSEGKTFVLNKINILFIVVFTIECVMKLVALRYYYFTNGWNIFDLVVVIMSIVGSLL
SGIVVSFSPTLFRVIRLVRIGRILRLIRSARGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMANFAYVKKEAGIDDMFNFETFPNSMLCLFEITTSAGWDGLLNPILNTGPPFCDP
NLGMTSTFSKGDCGSPAVGILFFVTYIIISFLIVVNMYIAVILENFNVATEESTEPLGDD
DFEMFYEVWEKFDPKATQFISFSELSNFAHALAEPLRIQKPNVLELMAMDLPMVTGDRIH
CLDILFAFTKRVLGDSGEMDTLKQQMEEKFMAANPSKASYEPITTTLRWKYEEASAAVIQ
KAFRSHLLQRSMKQASFLHRHKTSDGDILDEDAPEQEGLLAQLMNENYITDTDKSHTTSL
ESIPPSYRSVTGELDDAFEGEAAESPKNDKDREGQLFTDKGKRSNV
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtttattatggtcactattttcaccaattgtgtcttcatggctcttgcggacgtgcag
tcaaatagcagtgagacttcctccacgaagtatgttgagtatactttcacggccatttat
tcctttgaatgtctaatcaagatattggcaagaggcttttgcttgaatgaattcaccttc
cttcgagacccgtggaactggctggatttcagtgttatcgtgatggcacttttgggagag
tttattgatatgggcggtgtttccgtccttcggatgttccgggtgctgagagctttaaaa
accgtttccattatcccaggtctgaaagtcattgtaggtgccctaatccagtctgttaag
aaactcgcagatgttatgatcctgactgttttctgcctgagtgtgtttgccctcattggt
cttcaactctttaaaggacatttgagacacaaatgtgtcaagaactacacggaatatatc
agccagagcatatccaatgaaacatccttttcatctaaacagaacttgactccgtatgag
aattttaccaatagcccagtgaattacatacataagaatggcactgaagattatttattg
tgcagcaatgcttcagatggtggttcctgcccgccgaaatacgtatgtctgaaggttgga
gaaaatcctgactttgggtacacaagctttgatacgtttggctgggccttcctttccctg
ttccgcctcatgacgcaggattactgggaacgcctctatcaacagactctcagagcatct
gggaagatctatatgctgtttttcatgctggtcatatttctgggatcattctacctggtc
aacttgatcttggccgtggtcacgatggcctacgaagaacagagcacagccactattgct
gaaacagaagcaaaagaaaggaaatttcgtgaagccatggagatgctgaagaaagagcag
gaggaattagctgcaaaagaaaacgacagcatgtctcatagctcatttgaagtgtcacct
ataggttctaaagaggtcaaagaacgaagcaacagaatgaaaaagttgtctttggggatg
gaagattatggggaagatcccaaaaccccaaaatcacagtctagtgacagctatcggaaa
ccgtctctcattagccacaattatggtcctagttcaaacccaaccagacgccgaccaagt
catggaagtgtattcaatttccatgtatccggccgagatgctggctcaagggctgagttt
ggggaggatgaatctagcagcattggggagacggagatccagcacagcacactgctggct
gcacgaatgggaaggcgtccaagcatccaaagtcaaaccagctacagtcctcgcctgaca
gctccaaactacatgcagcccggcaaatgggccgctggagacgattgcaatgggatggtt
tcattgatggggggcagtggaacaaggccgtttaacatggatcccatttccaatgaaggg
tcattacttcctccagttatggaaaatcctgggaaaggagatctgactacttcttgtgat
gaagccaacaagaggttccaaactcagcgtctctcagtagattattataatcacccactt
caaagacaaagggcagcaagtgcagtcagcatcattaccagtgcgctggaagaacttgaa
gaatctaatcagaagtgcccccgcttcttgaagaacttggctgcaaagtatcttgtgtgg
aacttttgcccactgtggttgaagataaagaagaatgtgggcgtttttgttatggatcca
tttacggacctcacaatcacagtttgcattgtgatgaatactctctttatggcgctagaa
cactataaaatgtcccctgatttcgaggccatgcttgggataggcaacaagattttcacc
ggaattttcactgcagaagtgatcctgaaaatcattgcgctggatccctattattatttt
cagcagcgctcaaatatctttgacagtgtgattgtcttcataagcatcattgaactgagc
agtgaacccaaagagaataaggcatcagggaaaaaaggcagcaggaaaggaaattttaca
gttttacggaccttgaggctgatgcgagtcttcaagttggcgaagtcttggccaacctta
aacacccttattaagataattttaaactcagtggatgctctgggcaacctcaccctcgtt
ctggccattatcgtctttatcttcgctgtatttggaatgcagctatttgggggcaactat
aaaactcattgtaagaaattggccgatgactgcaaactacgatggcatatgcaagatttt
ttccactccttccttgttattttccgaattttgtgtggagaatggattgaaaccatgtgg
ggttgcatggtggtcaatgagcaatcaatgtgcttgcttgtcttcttgctggtcatggtg
attggaaatttagtggtgctcaatttgttcattgccctgctgctgaactcgttcagcact
gacaacctcctccaactcccggaagatgaccgagaaacgaacaaccttaaaattgccttc
gctcggatccaccgagggcttcatgcagcaaaacaggcaatgttggctttttgtttcaaa
gctcttgggtacaagcggaaggcagctaagaagaaaataaaatgtgaatctgagaagaat
gggctggagcttcgaaaagacctcccgaacttcaaggagagtcatggtaacagagagatc
gagaagaacggggagaggtgctccgttcatatcccggatgatttcatcagcaaccccaat
gtgtttgtctgtgttcccattgctgcccctgagtccgatagcgaggggtctgaagatgct
gatgagaagcagggggcagccatggagacagaatatactgagaaggaaaaccagctgcga
ttgagaggagagcggagcaagagttccgatgcctggagccgaacatctgaaatctcctct
cctggggaaacaagtatgcattggaaagctgggtcctcatcaccaaaagaaaaagagaga
gctgacattattagctgctcagaaggcagcactgtggacctagcaaactcagaagaattt
ctgaagcagatccctgaactagctgaggactcggagccagataattgttttcctgaaaaa
tttgcgcagcgttatccttggtgtatggtgaacactgaaaagtttccaggcagattatgg
tggaacctaagaaagacatgctaccgaattgtagagcacaactggtttgaaagcttcatt
gtgttcatgattctgctgagcagtggagctctggtctccttagtaaccctcgtagcaact
ttggctggacaatctgacatgggtcccataaagtctctcagaaccctaagagctttgagg
ccattaagagccctgtcacgatttgaagggatgagggtggtggtcaatgccttggtgggc
gccatcccatctattatgaacgttcttctggtctgcctcattttctggctcatcttcagc
attgtgggagtcaatctgtttgcaggaaagtttggaaaatgcgttaacatgactgatgaa
gatggcagcgtaaatgagaccataattactaacttcagcgactgtaaggagcacaacagg
accgatgggatattatactggattacagttaaagtgaattttgataatgttggctctggc
tacctggctcttctccaagtggcaactttcaaaggttggatggatataatgtatgcagca
gcagattcaactgatgtggaataccagcccaaatgggaagctaacaaatatatgtacatc
tattttgtggtttttatcatctgtggctccttcttcactctgaaccttttcgttggcgtc
attattgataattttaatcaacaaaagaaaaagtttggtggagaagacatcttcatgacg
gaggaacaaaaaaaatattataatgccatgaagaaactggggtccaagaaacctcaaaaa
cccatcccacggccactgaacacataccaaggattcctcttcgacatcgtaactcgccaa
gctttcgatgttgccatcatggccctcatctgccttaatatggtcacgatgatggtggag
tcagacgaccagtccgaagggaagacatttgttcttaacaaaataaacatcctcttcatc
gtcgtcttcacaatagagtgtgtcatgaagctggtggctctgagatactactacttcacc
aacggatggaacatttttgacctggtggtcgtgatcatgtcaattgttggcagcctgctt
tccggcattgtggtttcattttcgcctacacttttccgggtgatacgtctggtgcgaata
gggcgaatactccgcctgatccgatccgccagagggatcaggactcttctctttgcctta
atgatgtccctccctgccttgttcaacatcggcctcctgcttttcctagtcatgttcatt
tatgccatttttggcatggccaactttgcctacgtcaaaaaggaggctgggattgatgac
atgttcaactttgagacctttcccaacagcatgctctgcctcttcgaaatcaccacgtct
gccggctgggatggactcctcaaccccatattgaacactgggcctccattctgtgacccg
aacctcggcatgacgtcaactttctccaagggtgactgtggcagccccgcagtgggaatt
ctgttctttgttacttacataattatatcctttctcatagttgtaaatatgtacattgca
gttattctggagaacttcaatgttgccacagaagagagcactgaacctttaggtgacgat
gacttcgaaatgttttatgaggtgtgggagaagtttgaccctaaagctacccagtttatt
tcattctccgaactttctaacttcgctcatgcgctggcagagcctttgcgcatacagaag
ccaaacgtgcttgagctgatggccatggatcttcccatggtaactggggataggatccac
tgcttggacatcctctttgctttcaccaaaagggttcttggagactctggagagatggac
acccttaagcaacaaatggaggagaaattcatggcagcaaacccgtccaaggcttcttac
gaaccaatcaccaccacactcaggtggaaatacgaggaggcgtctgccgctgttatacag
aaggccttccggagtcatttgctccagcgttccatgaagcaggcttctttcttacatcga
cacaaaaccagcgatggagatatccttgacgaagatgctccggaacaagaaggtctcctt
gcgcagctaatgaatgaaaactatatcacagacacagacaagtcccacacaacatccttg
gaatctattcctccatcttaccgcagtgttactggagaactcgatgatgcttttgagggg
gaagcggcagagtctcctaaaaatgacaaagatagagaaggccagctgtttacagacaaa
ggcaagaggtctaacgtgtag
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