Podarcis raffonei (Aeolian wall lizard): 128423955
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Entry
128423955 CDS
T09310
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128423955 (VPS50)
Membrane trafficking [BR:
praf04131
]
Protein recycling
Others
EARP complex
128423955 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF3850
DcpS_C
Motif
Other DBs
NCBI-GeneID:
128423955
NCBI-ProteinID:
XP_053265582
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All DBs
Position
12:27328861..27413979
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESIHDLSPLENFRIPSKEELRELREQPTDPQAQQELINSIEEV
YFSSDSFDIVKYELEKLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTSLQLAAVICTNGRRHLSTAKEGFTQASLGLLANQRKRQLLMGLLKSLRTIKTL
QQTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCMHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKYDHGEPPSSSDG
SNVMGAEETNFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSI
LQLHEFKFMAQSRSPSVSPSKQPASEIERTITLFEQYCNGGNPFEIQANNRDDETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLRSRKRSDYCLS
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYMYAIYMFFGRNDTF
ETTGLGLSSSRLRTTLNRIQESLIDLEVSSDAAGTLTAVEERKEKVPTPHLSHLVVLTSG
STLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPPAKKPFLQQFYSQTVSTASELRKPI
YWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEQFNRQLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSAKQLTNLVNVCLGTHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctttgatgacccgacagggcctgaaaagtcctcaggagagtatt
catgatctgagccccctggagaacttccgaattccaagcaaggaggaacttagagagctc
cgggaacaaccaactgatcctcaagctcagcaagaattaattaacagcattgaagaagtc
tatttttccagtgattcctttgacattgttaagtatgagttggagaagctgcctcctgtt
cttagtcttcaagaactggaagaatacagagacaaactaaagcaacagcaagctgctgta
tctaaaaaagttgcagacttgatactcgaaaaacaaccttcatatgtcaaggagcttgaa
cgagttacatccttacagactagcctccaattagctgctgttatttgcacaaatggaaga
cgacatctgagcacagcaaaagagggttttactcaagccagcttgggcctccttgccaat
caacgaaaacgccagttgctgatggggctgctaaaatctctgagaacgataaaaaccctg
caacaaactgatgtccgcttaagtgaaatgttggaggaggaggattaccctggggctatc
cagctctgcctggaatgccagaaagcagctagcactttcaaacactacagttgcatcagt
gaattgaattcaaaactacaggacactttggagcaaattgaggagcagttagatgtcgcg
ctttccaaaatctgcaagaactttgacatcagccactataccaaggtgcagcaggcttac
agactacttgggaaaacgcagacagccatggaccaactgcacatgcactttactcaagcc
attcacaacactgtattccaagttgttctcggttacgtagagctgtgtgcgggaaacaca
gacaccaagttccagaaacttcagtacaaggacctgtgcatgcacatcacgtcagacagt
tacattccttgccttgctgacctctgcaaagccctgtgggaggtcatgctcagttactac
cgaaccatggagtggcatgaaaaatacgatcacggtgaacctccttcgtcttctgatgga
agcaacgtcatgggtgctgaggagaccaattttgaccgcagctacgtgaaaaagaaattg
gaacatggactttcgcgaatatggcaggatgtccagctgaaagtgaagacctatttgctt
ggcacagacatgtctaacttcaaatacgatgacttcatcttcgtcctggatattgtcagc
aggctgatgcaggttggtgaagagttttgtggcagcaagtcggaggttttgcaagaatcc
attagaaaacaaagtgtgaattatttcaagaactatcacagaacccgcctcgaagaactg
cgaatgttcttggagaacgagacgtgggagctttgtcctgtgaaatcaagcttcagcata
ttacagcttcatgaatttaagttcatggcacagtcccgttccccttctgtgtcgccaagc
aagcagcctgcttcagaaatagaaagaaccataactctgtttgagcagtactgtaatgga
gggaatccctttgaaatccaagccaacaacagagatgacgagactgaggatgtgctggct
tccaatgggtatgaatcggatgagcaggaaaagagtgcctatcaagagtatgacagcgat
agcgacgttcctgaagaactgaagagagactatgttgatgaacagactggagatgccccg
gtaaaaagtatttctcgagaaactttgagaagcaggaagcgatcagattattgcctcagt
aaggtgaacgctcccattttgaccaacactacactgaatgtaataagacttgttggcaaa
tacatgcagatgatgaacatcttgaagccaattgcatttgatgtgatccacttcatgtcc
cagctttttgactactacatgtatgcaatatatatgttttttggccgaaatgacacgttt
gaaacgacaggactgggactcagcagcagccggcttcgaaccacactcaacagaatacag
gagagcctgattgatctggaggtctcctctgatgctgctggaacgctgactgctgttgaa
gaaagaaaggaaaaggttccaaccccccatctcagccaccttgtcgtcttgacatcaggc
agcactttatatggcttggcagagagagtggtcgccacagaatccttagtgtttttagct
gagcagtttgagttcctccagtctcatcttgatgctgtaatgcctccagccaagaaacct
tttcttcagcagttctattcgcagacggtttcaacagccagtgaactccgtaagcctata
tactggattgtagctgctaaagcaattgattacgaacagatgctgctgctaatggcaaat
gtgaaatgggatgtgaaagaaatcatgtcacaacacaacatttatgtagattctctttta
aaggaatttgaacagtttaacaggcagctgaatgaggtttctaagagagttcgtattcca
ttgccagtgtcaaatattctttgggagcattgtatacgactagctaatagaactattgta
gaaggttacgcaaatgtcaaaaagtgtagcaacgaggggcgtgccttgatgcaactggac
tttcagcaatttttaatgaagctggagaaactcacggatattagacctattccggataag
gaatttgttgaaacctacatcaaggcttattatttgactgaaaatgacatggaacgctgg
atcaaggagcaccgggagtattctgccaagcagttgactaatctggtgaacgtttgtctg
gggacccacatcaacaaaaaagcacgacaaaaactgttagcagctatcgacgacattgat
aggcctaaaagataa
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