Podarcis raffonei (Aeolian wall lizard): 128424014
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Entry
128424014 CDS
T09310
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128424014 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128424014 (SMARCD3)
03036 Chromosome and associated proteins [BR:
praf03036
]
128424014 (SMARCD3)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128424014 (SMARCD3)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128424014 (SMARCD3)
PBAF complex
128424014 (SMARCD3)
GBAF(ncBAF) complex
128424014 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
128424014
NCBI-ProteinID:
XP_053265739
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All DBs
Position
12:837894..876595
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AA seq
596 aa
AA seq
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METRAEAFGKEEGKEGSCRVGLGSPVAAAAAELLCLLLARTDGRAEEQQPRLLGRRPSAR
PAGNSRRLAAAPQSRAPEAAGGGAHEHYRAWPARQGGTHEPQSGPDEDRGSRRPGMPSGA
RMPHQGAPMGPPGPPYVGSPSVRPGMPQAVMEPTRKRAAPQQAQQQQAAQQQAQQQQQAG
AATQNRPRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALK
RPMKQKRKLRLYISNTFNPAKSDADDSDGSIASWELRVEGKLLDDLSKQKRKFSSFFKSL
VIELDKDLYGPDNHLVELLHTGSKSPSSYPLRTKVCFLWHRTPTTQETDGFQVKRPGDVS
VRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINC
DKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDP
LKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKGYIQDLLRSQ
SRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSLGVRNT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgggcagaagcatttgggaaggaagaggggaaggaaggaagctgccgtgtg
ggtcttggcagccccgtcgcggcggcggcggcggagcttctttgtctcctcctggcccgc
acggacggcagggcagaggagcagcagccccggctcctggggaggcgcccctcggcgcgc
ccggccggcaactcccgccgcctcgccgcagccccccagtcccgggcgccggaggctgca
ggcggcggagcgcacgagcattaccgcgcctggcctgcgaggcagggaggcacccacgag
ccccagagcggacccgacgaggaccggggcagccggcgtcctgggatgccatcaggcgct
cgcatgccccaccagggggctccaatgggtcccccaggccccccctacgtcgggagccct
tccgttcgccccgggatgccccaggccgtgatggagcccacgcgcaagcgggcagcgccc
cagcaggcgcagcagcagcaggcggcgcagcaacaagcgcagcagcagcagcaggcgggc
gccgccacgcagaaccggcccaggagcgccaagaggaggaagatggctgacaagattctc
ccacagaggatccgggagctggtgccagagtctcaggcctacatggacctgctggcgttc
gagcggaagctggaccagaccatcatgcggaagcgagtggatatccaggaggccctgaag
aggcccatgaagcaaaagcggaagctgcgcctttacatctccaacaccttcaacccggcc
aagtcggacgcagatgactcagacggcagcatcgcctcctgggagctgcgggtggaaggc
aaactgctggacgatctcagcaagcagaaaaggaagttttcctctttcttcaagagtttg
gtcatcgaactggacaaggacctgtatggaccagacaatcacctggtggagctgctgcac
actgggtcgaaatctccgtccagctatccactcagaaccaaggtctgtttcctgtggcac
aggacccccaccacccaggagacggacggcttccaggtgaagaggccgggggacgtcagc
gtgcgctgcaccctcctgctcatgctggactaccagcccccccagttcaagctggacccc
cgcctcgcccgcctcttggggatccacacgcagacgcgctcggccatcatccaagccctc
tggcagtacatcaagaccaacaagctgcaggactctcacgacaaggagtacatcaactgt
gacaagtacttccagcagatctttgactgcccgcggctaaagttttccgaaatcccacag
aggctgacgaacttgctgctgccgccggatcctattgtcatcaaccacatcatcagtgtg
gaccccaatgaccagaagaagaccgcctgctacgacattgacgtggaagtggaggacccc
ttgaaggggcagatgagcagcttccttctctcgacagcaaaccagcaggagatcacagcc
ctggacaacaagattcacgagacaatcgagtccatcaaccagctgaagatacagagggat
tttatgctcagcttctccaaagaccccaaagggtacatccaagatctcctccgatcccag
agcagggatctcaaggtgatgaccgacgtggtggggaatcccgaggaggagcggagggca
gagttttaccacgagccgtggtcccaggaggccgtgagcaggtacttctactgcaagatc
cagcagcgtcgtcaggagttggagcagtctctgggggtgcgtaacacctaa
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