Podarcis raffonei (Aeolian wall lizard): 128424418
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Entry
128424418 CDS
T09310
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
praf03032
]
128424418 (TOP2B)
03036 Chromosome and associated proteins [BR:
praf03036
]
128424418 (TOP2B)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
128424418 (TOP2B)
DNA replication proteins [BR:
praf03032
]
Eukaryotic type
DNA Topoisomerases
128424418 (TOP2B)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
128424418 (TOP2B)
Centrosome formation proteins
Centriole proteins
128424418 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
DUF7180
Motif
Other DBs
NCBI-GeneID:
128424418
NCBI-ProteinID:
XP_053266499
LinkDB
All DBs
Position
12:complement(41774096..41816207)
Genome browser
AA seq
1653 aa
AA seq
DB search
MAKSGGGGGGGGGGGGGGGGGGGGGGGGGGSGGLTWVTLFDNQNNASKKEEPEHMNKNDS
KKMSVERVYQKKTQLEHILLRPDTYIGSVEPVTQLMWVFDEDIGMNCREITYVPGLYKIF
DEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKMYVPALIFGQL
LTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSDAK
IKHFEGDDYTCVTFQPDLAKFKMEKLDKDTVALMTRRAYDLAGACKGVKVMFNGKKLPVN
GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH
VDYVVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPSFDSQTKENMTLQP
KSFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDAN
DAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENA
EINNIIKIVGLQYKKSYEDPESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLL
KHGFLEEFITPIVKASKNKQELAFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTSKEAK
EYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFL
YGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVA
QLAGSIAEMSAYHHGEQALMMTVVNLAQNFVGSNNVSLLQPIGQFGTRLHGGKDAASPRY
IFTMLSPLARLLFPTVDDNLLKFLYDDNLRVEPEWYIPIIPMVLVNGAEGIGTGWACKIP
NYDTREIVNNVRRMLDGLDPHPMLPNYKNFKGMIQELGQNQYVVSGEIFVVDRNTVEITE
LPVRTWTQVYKEQVLEPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGL
HKVFKLQTSLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLNYYSLRKEWLVGMLGAES
TKLNNQARFILEKIQGKITIENKSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEEMQN
LNDDSSDSSGSTSGPDFNYILNMSLWCLTKEKVEEIIKQRDTKGKDLADLKRKSPSDLWK
EDLAAFVEELDKVEAQEREDVLSGMTAKPIKGKVGKPKMKKLHLEETMPSPFGRRIVPQI
TSAMKADASKKLLKKKKGELDTLAIKLEFDEEFGGIPVEGAGEDSLNTSVPVASPVVSPV
ASPVAKTPKPKREKKEPGPRVRRTPSSATKSSAKKVKKRNPWSDDESKSESDLEENEPVI
IPRDSLLRRAAAERPKYTFDFSEEEDDGEGDEDANNNNDLDELKIKTSPIINDREDEFEP
LDGLEKDEYDFSPVKSKPSPEKISPEKTNQDFGNLFTFPSYSRKANIDTSKFDSDDEDST
PVFSSSFTQKQTEKPPSKVVVAKKAAKLPADVPSKPKRPPKPKKMEIINSDSEPEFGIPK
KAATPKVGKGRGAKKRKASGSENEGEYNPGKKTPKSTPSKKPKKASFDQDSDVDIFPSEF
ASEAASRPRTGRARKEVKYFAESDEDDDFAMFN
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaggaggaggtggtggaggaggaggaggtggaggcggcggcggcggcgga
ggaggtggaggaggcggcggcggcggcggcagcgggggtttaacctgggtgacacttttt
gataatcagaataatgcttcaaaaaaggaagaacctgaacacatgaataagaatgattca
aagaagatgtctgttgagagagtttatcagaaaaagactcagcttgagcatattctcctc
cgtcctgatacatacattggttcagtggaacctgtaactcagctgatgtgggtgtttgat
gaagatataggaatgaattgtagagagattacctatgtacctggcttatacaagatcttc
gatgaaattcttgtaaatgcagcagacaataaacagagggataagaatatgacatgtatt
aaaatatcaattgatcctgaatcaaatattataagtatctggaataatggaaaaggcatt
ccagtcgtggaacacaaggtagaaaagatgtatgttcctgccttaatctttggacagctg
ttaacttccagcaattatgatgatgatgagaaaaaagttacaggtggtcgtaatggctat
ggtgcaaaactttgtaatatattcagtacaaagtttacagttgaaactgcttgcaaggag
tacaaacacagctttaaacagacttggatgaacaatatgatgaagacttctgatgccaaa
ataaaacattttgaaggcgatgactacacatgtgtcacattccaaccagatcttgctaaa
tttaagatggagaaacttgacaaagatactgtggcccttatgacaagaagagcttatgat
ttggcaggagcatgtaaaggggtcaaagttatgtttaatggaaagaaactacctgtgaat
ggttttcgtagttacgttgatctttacgtaaaagacaagttggatgaaactggagttgct
ctgaaagttatccatgaacttgcaaatgaacgctgggatgtatgtctcactttaagtgag
aaaggatttcagcaaattagctttgtgaacagtattgctaccacaaagggtggtaggcac
gttgattatgttgtagatcaaattgttgggaaattgatagaggtggtgaagaaaaagaac
aaagctggcgtttcagtgaaaccattccaggtaaagaaccacatatgggtttttattaat
tgcctcattgagaacccgtcttttgattctcaaacgaaagagaacatgacacttcagcct
aaaagttttgggtccaagtgccagttatcagagaagtttttcaaagcagcctctaattgt
ggtattgtagaaagcatcctgaattgggtgaaattcaaggcacaaacacagctgaacaaa
aaatgttcatcggtgaaacacagcaaaattaagggcattccaaaactcgatgatgctaat
gacgctggtggcaaacattccttggattgtacattgattttaactgagggagactctgcc
aaatctttagctgtctctggcttaggtgtcattggaagagatagatatggtgtgtttcca
ctcaggggcaaaattctcaacgttcgagaagcatctcataaacagattatggaaaatgca
gaaattaacaacatcataaaaattgtaggtctacaatacaagaaaagttatgaagaccca
gagtctttgaaaacattaagatatggcaaaataatgatcatgactgatcaggatcaggat
ggatctcacattaaaggcttgctgatcaattttattcatcataattggccttcccttctg
aaacatggatttcttgaagaattcatcactccaattgtaaaggcaagcaaaaataagcag
gaacttgccttctatagtattcctgaatttgatgaatggaaaaaacatatggagaaccat
aaagcatggaaaataaagtattacaaaggtttgggcaccagcacttctaaagaagcaaaa
gaatattttgcagatatggagagacatcgaattttatttcgatatgctggtcctgaagat
gatgccgccattacattggccttcagtaagaaaaaaattgatgaccgaaaagagtggctg
acaaatttcatggaagatagacgacagcgtcgattacatggattaccagagcaatttcta
tatggtacagcaacaaaacatctcacttacaatgacttcatcaacaaggagttgattctt
ttctccaactcggacaatgagcgatccattccatcccttgttgatggttttaaaccagga
caacgcaaggttttgttcacttgttttaaaagaaacgataagcgtgaagttaaagttgct
cagctggctggttctattgctgagatgtcagcgtaccatcatggagagcaagctttgatg
atgaccgttgtcaacttggctcagaacttcgttggaagtaacaatgtcagtttactgcag
cctattggtcagtttggtaccaggcttcatggtggcaaggatgccgcaagtcctcgttac
attttcactatgctaagccctttagcaaggctgctttttcctacagtggatgataatctg
cttaaattcctttatgatgataacttgcgtgtggagcctgaatggtacattcccataatt
cccatggtcttagtaaatggtgccgagggcattggaaccggatgggcatgtaaaattcca
aactacgataccagagagattgtgaacaacgtcagaagaatgctggacgggttggaccca
catcctatgcttccaaactacaaaaacttcaaaggaatgatccaggaacttggtcagaac
caatatgtagtgagtggggaaatatttgtggttgacaggaacacagtggaaatcacagag
cttccagttcgaacatggactcaggtttacaaagaacaggtgttagagccgatgctgaat
ggaacggaaaaaacaccagcattaatttcagattacaaggagtatcacactgatacaact
gtgaaatttgttgtgaaaatgaccgaagaaaagcttgctcaggccgaggctgctggactt
cacaaagtctttaagcttcagacaagtttaacttgtaattctatggtgctatttgatcac
atggggtgtctgaagaagtatgaaactgtgcaagatattctgaaggaattttttgactta
cgattaaactactacagcttgcgcaaggagtggcttgtagggatgctgggggcagaatcc
accaagcttaacaatcaggctcgctttatactagagaaaatacaagggaaaattaccata
gagaataaatcaaagagagatttgattcaaatgttagtccagagaggctatgaatctgac
ccggtgaaagcctggaaagaagcacaagaaaaggcagcagaagaggaagaaatgcagaat
ctcaatgatgacagttccgactcttccggatctacctcaggcccagatttcaactacatc
ttaaatatgtctttgtggtgtcttactaaagagaaagtagaagaaatcattaagcagcgg
gacacaaaaggaaaggatctcgctgacctcaagagaaaatctccttcagacctttggaaa
gaagatttagcagcctttgtagaagagcttgataaagtagaagcacaggaaagagaagat
gtcttgtctggcatgacagcaaaacctattaaaggcaaagttggtaagcccaagatgaag
aaacttcacctagaagagacgatgccatcgccatttggtaggagaatagttccacagatt
acatctgctatgaaagctgatgccagtaagaaactactaaaaaagaagaagggagaactg
gatactctagcaataaaactggaatttgatgaagagtttggtggcataccagtcgaaggt
gctggtgaagattcactgaatacctctgtcccagtggccagcccagtggtcagcccagtg
gccagcccagtggccaaaacacctaagcccaagagagagaagaaagagcccggccctagg
gtgagaagaacaccgtcttccgccacaaagtccagtgcgaagaaagtgaagaaacggaac
ccgtggtcagatgatgaatctaaatctgaaagtgacttggaagaaaacgaacctgtgatt
attccaagagactcgttacttagaagagccgcagctgaaaggcctaagtacacctttgat
ttctcagaagaggaagatgatggtgagggtgacgaagatgctaacaataataatgatcta
gatgaactgaaaataaaaacatctcccatcatcaatgacagagaagatgaatttgagcct
ttagatggtctagaaaaggatgaatatgacttctccccagtcaaatcaaaaccttctcca
gagaagatttccccagagaagaccaatcaagacttcggcaacctcttcacctttccttct
tattcccggaaagccaatattgatacatccaagtttgacagtgatgacgaagattcaaca
ccagtcttctcctcctcttttactcagaaacagacagagaaacctccaagtaaagtggta
gttgctaaaaaagcagcaaaactgccggcggatgtgccctctaaaccgaaaagacctcct
aagcccaagaagatggaaataattaactctgattcagaacctgaattcggcatcccaaag
aaggctgcaactcccaaagtaggaaaaggcagaggagcaaagaaaaggaaagcgtctggt
tctgaaaatgaaggtgaatataacccggggaagaaaacacccaagtctacgccaagcaag
aaaccgaagaaagcctcctttgatcaggactcagatgtagacatcttcccctcagagttt
gcctctgaagcagcctccaggccgcggactggacgggcgagaaaagaagtgaaatatttt
gcagagtctgatgaagatgacgattttgcgatgtttaattaa
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integrated database retrieval system
