Limnobaculum zhutongyuii: EKN56_00065
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Entry
EKN56_00065 CDS
T06157
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EKN56_00065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prag02000
]
EKN56_00065
02044 Secretion system [BR:
prag02044
]
EKN56_00065
Transporters [BR:
prag02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
EKN56_00065
Secretion system [BR:
prag02044
]
Type I secretion system
Adhesin protein transporter
EKN56_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
AAA_29
SMC_N
DUF87
MeaB
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QBH94945
UniProt:
A0A411WFF1
LinkDB
All DBs
Position
49702..51867
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AA seq
721 aa
AA seq
DB search
MSQDFAPATDAQQDSLLWSVQWLAAYYNKPASAAVLYAGLPKEPKLTSQLALRMLDQIGM
GVAWVERDLDQLFSYLFPVVLTRKDGSHCIVTERSSGKGAGSSYRVILPENGGEVTLSAR
ALEEMYSGYALLCNPKPKLDERSNDCLPEPNKEGHWLFSTLWRYRHYFASAALAALLANV
LTLASTFFTMNVYDRVVPTQAYVTLWSLGIGVFIAIIFEFVSRLVRSHLFDIAGKKADLL
LGTMLFRQVLGIRMESKPQSSGAFANQLREFESVRDFVTSATLSTLSDLPFCALFLFIIY
LVAGPLVLVPLCAVPIILIVSLCVQWPLAKNMKENLREISLKQGLLIETIDGLESLKAAQ
GEGVMQKRWEDFSALAAATSMKTKALSSTTTTFVSFMQQLTTVAIVIWGVYLIHAGELTM
GSMIGAVILSGRTLSPLGSVVGLTLRFQQAKAALSSLNQLMKMPTERDEKIHYLSAPNFT
GNLRLKNVNFSYPSGNMMMSAPVVLQKINISIRRGERVAILGSIGSGKSTLLKVMARLFQ
PGGGQLMIDNVDATQVDPADWRTSVGYVGQDSRLFFGTLRENVTIGNPSVATEELLQVAR
MTGLDKVAMRHPLGFEMPIGEMGQGISGGQKQLVSLARCLLLKPKILLMDEPTSSMDAMT
ELQFINKLKTSITDQTVVLVTHRFSLLELVDRLIVLDEGKVVADGPKDEVIAALKANGKA
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggatttcgcccccgcaacggacgctcaacaggacagcttactctggtccgtt
cagtggctggcagcatattacaataaaccggccagtgccgcggtactgtacgccgggctg
cctaaagagccgaaactaacttcccagcttgccctgcgcatgctggaccagatcggcatg
ggcgttgcctgggtggagcgggatttagaccaactgttctcttacctgttcccggtggtg
cttacccgtaaagacggtagccactgtatcgttaccgaacgcagcagcggtaaaggtgcc
ggttcatcctatcgggtgatcctgccggaaaacggcggcgaagtaactctgtctgcccgt
gcgctggaagagatgtattccggttacgccctgctgtgtaaccctaaacccaaactggat
gaacgcagcaacgactgcctgccggaaccgaataaagaaggccactggctgttctccacc
ctgtggcgctaccgccactactttgccagtgcggcccttgctgcgctgttagccaacgtc
ctgacgctggcctccaccttcttcaccatgaacgtgtatgaccgggtggtaccgactcag
gcctatgtgactttatggtcattaggtatcggcgtatttatcgccatcatcttcgaattt
gtctcaaggttagtaagatctcacctgtttgatattgcgggtaagaaagcagatttactg
ctgggaaccatgttgttcaggcaagtgctggggatccgcatggagagcaaaccgcaatcc
tctggtgcctttgctaaccagttgcgtgaatttgaatcggtgcgcgatttcgttacctcc
gcgacgttatcaacgctgtcggatctgccgttctgtgcgctgttcctgtttatcatctat
ctggtagccggtccgctggtgctggttccgttgtgtgcggtgccgattatcctgattgtc
agcctgtgcgtgcagtggccgctggcaaaaaacatgaaggaaaacctgcgggaaatctcc
cttaaacagggcctgctgattgaaaccatcgacgggctggaatcgctgaaagctgcgcag
ggtgaaggggtgatgcaaaagcgctgggaagacttcagtgcgctggcagcggccacctca
atgaagactaaagcgttatccagtaccaccaccacctttgtcagctttatgcaacagctg
accacggtggccatcgttatctggggtgtctatctcatccatgccggtgaactgaccatg
ggttcgatgatcggtgcggtgatcttatcgggtcgtactctgtcgccactgggttcggta
gtgggtctgaccctgcgtttccagcaggcgaaagccgcgctgagttcactgaaccagtta
atgaaaatgcctaccgagcgtgacgagaaaattcactatctgtcggctcctaactttacc
ggcaacctgcgtttaaagaacgtcaacttcagttacccgagcggcaacatgatgatgagt
gcgccggtggtactgcaaaaaatcaatatctctatccgtcggggtgagcgggtggcgatc
ctcggcagcatcggcagcggtaaatctactttattgaaagtgatggcacgactgttccag
ccgggtggcggtcagctgatgatcgacaacgtggatgccactcaggtagacccggcagac
tggcgcacctcggtaggctatgtggggcaggacagtcgtctgtttttcggcaccctgcgg
gaaaacgtcaccattggtaatccatcggtggcgaccgaagagttattacaggtagcccgt
atgaccggcctggacaaagtggcgatgcgccacccgttaggctttgaaatgcccatcggc
gaaatgggacagggtatttccggcggtcagaaacagctggtatcactggcccgttgcctg
ctgttaaaacccaaaattctgctgatggatgaaccgaccagttcgatggatgctatgacc
gaattgcagtttatcaataagttaaaaacctccattactgaccagacggtggtgctggtc
actcaccgcttctcactgctggagctggtggaccggctgattgtgctggatgagggcaag
gtggtggcggacggaccaaaagatgaagttatcgccgctcttaaagctaacggtaaggcg
cagtaa
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