Limnobaculum zhutongyuii: EKN56_00665
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Entry
EKN56_00665 CDS
T06157
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKN56_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prag03400
]
EKN56_00665
Enzymes [BR:
prag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKN56_00665
DNA repair and recombination proteins [BR:
prag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKN56_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
AAA_22
zf-C2H2_FBX41
AAA_19
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QBH95058
UniProt:
A0A411WFM6
LinkDB
All DBs
Position
complement(226635..228830)
Genome browser
AA seq
731 aa
AA seq
DB search
MSVVNVVLPVPLDRSFDYLLPPGEQAIIGARVSVPFGKREAIGIIVSTSEQSEFPLSQLK
TINHLIDDQSLFTPSLWKTLLWASGYYQFPLGEVLFHALPVLLRQGKPAQEPPIWQWQLT
EEGKITDPVTLKRAPKQQQALAALRKANIYRHQISSLDLNEAAFQALKNKGLAQLAALYP
AATRWQDDFKINGERLRLNTEQATAIGAIRSDDQQFGVWLLEGITGSGKTEVYLSVLENI
LSEGRQALVLVPEIGLTPQTIARFRERFNAPVDVVHSGLNDSERLAVWLRARRGETAIVI
GTRSALFTPFKHLGVIVIDEEHDSSYKQQEGWRYHARDLAILHAREENIPVILGSATPAI
ESLHNAQSGKYHHLRLTLRAGHAKPATQYILDLKGQPLTAGLAPAMLKRMKEHLQANNQV
ILFLNRRGYAPALLCHECGWIAECSRCERYYTLHQNQRMLCCHHCDSQRPVPYQCPKCGS
THLVPVGVGTEQLDNELARLFPDTPITRVDRDTTSRKGALEQHLADIHQGGARILIGTQM
LAKGHHFPDVTLVGLIDVDGALFSADFRAAERFAQLYTQVSGRAGRAGKQGEVLLQTHHP
EHPLLQTLLHQGYDAFAKQAIEERKSVFLPPFTFHALFRAEDHDNQQASQFLQQLKELLE
NVRASDSSLWILGPVPALQAKRGGRFRWQLLIQHPSRGRLQQILHALRLQITAMPQAKKV
KWTLDIDPIEG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtgaatgtcgttttaccggtgccgctggaccgttcgtttgattatctcctg
ccaccaggagaacaggcgattatcggagccagagtcagcgtgccatttggcaagcgggaa
gccatcggtattattgtcagcaccagcgaacaaagcgaattcccactatcacagttaaaa
accattaatcacctgattgatgaccagtcgctgtttactccctccttatggaaaacctta
ctttgggcctctggctactatcaatttcctctgggggaagtactgtttcatgccttaccg
gttttactccgtcagggaaaacctgctcaggaaccgcccatctggcaatggcaactcacc
gaagagggaaaaataaccgacccggttaccttaaaacgagcgcctaaacagcaacaggcg
ctggcagcgctacgtaaagccaatatctaccgtcaccaaatcagctcgctggatttaaac
gaggctgcttttcaggccctgaaaaataaagggctggctcagttagcagcgctctatccg
gcagccactcgctggcaggatgattttaaaattaatggtgaacgcctcagactgaatacc
gaacaggcaaccgccattggtgctattcgtagtgatgaccagcaatttggcgtctggctg
ctggagggaattaccggttccggtaaaacggaagtgtacctgagcgtactggaaaatatt
ctgtccgaaggacgacaggcactggttttagtccctgaaatcggtttaacgcctcaaacc
attgcccgttttcgtgaacgttttaatgcaccggttgacgttgttcactccggtctgaat
gacagtgaacgccttgcggtgtggctacgggcacggcgaggagaaaccgccatcgttatt
ggtactcgctcagcgctgtttacgccatttaaacacctgggcgttatcgtcatcgatgaa
gaacatgatagctcttataaacagcaggaaggatggcgataccacgcccgtgatttagcc
attcttcacgcccgcgaagaaaacattccagtgattctgggatcggcaacgccggcgatt
gaaagcctgcataacgctcaaagcggtaagtatcaccatctacgtcttactctgcgtgct
ggccatgctaagccagccacccaatatattctcgatttgaaaggccagccgctcaccgcc
ggactggcacccgcaatgctcaaacgcatgaaagagcatttgcaggccaataatcaggtc
attctgtttcttaaccggcgaggctatgctccggcactgttatgccacgaatgtggctgg
attgcagaatgtagccgctgcgagcgttattacacgctacatcagaaccagcgtatgttg
tgttgccaccattgcgacagccagcgtccggttccttatcagtgccctaaatgtggttca
acccatttggtgccggtcggtgtgggaacagagcaattagataacgagcttgcccgcctg
tttccggatacgccaatcacccgagtcgaccgggataccaccagtcgtaaaggcgcactg
gagcaacatcttgcggatattcatcagggtggcgctcgtattctgattggtacacagatg
ttagcaaaagggcaccatttcccggatgttacgctggttggcctgattgacgttgatggc
gcactattctctgccgatttccgcgccgctgaacgttttgctcagctgtatacgcaggtt
tctggtcgtgccggtcgtgcgggtaaacagggtgaggttttactgcaaacccaccatccg
gagcaccctctgctacaaaccctgctgcaccaaggctatgacgcctttgctaaacaggca
attgaagagcgtaaaagcgtcttcctgccaccgtttaccttccatgccctgtttcgtgcc
gaggaccatgataaccagcaggcttcacagtttttgcagcaactgaaagagctgttggaa
aacgtcagagccagtgacagttcgctctggatccttggccctgtccccgctttacaagcc
aaacgcggcggtcgtttccgctggcaattgttgatccaacacccatctcgtggtcgtttg
cagcaaattttgcacgcgctgagattacaaataaccgctatgccacaggccaaaaaagta
aaatggacactcgatattgatccaatagaaggttag
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