Limnobaculum zhutongyuii: EKN56_00785
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Entry
EKN56_00785 CDS
T06157
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
prag
Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prag03016
]
EKN56_00785 (trmA)
Enzymes [BR:
prag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
EKN56_00785 (trmA)
Transfer RNA biogenesis [BR:
prag03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
EKN56_00785 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_11
Methyltransf_12
TRM5-TYW2_MTfase
PrmA
Motif
Other DBs
NCBI-ProteinID:
QBH95081
UniProt:
A0A411WFJ8
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All DBs
Position
complement(258508..259611)
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AA seq
367 aa
AA seq
DB search
MTPEMLPTDQYDAQLAEKKHRLISMMAPYSAPEPEVFRSPLSHYRMRAEFRIWHQGDDLY
HIMFDQATKQRIRVDVFPAASELINRLMPELLAGVKPHASLRHKLFQIDYLSTLSGEIVV
SLLYHRQLDDLWLQHAEQLRDDLRSRGFNLQLIGRASKQKICLDRDYVDERLPVGGQEMI
YRQTENSFTQPNAAVNIHMLEWAIDVTQGSKGDLLELYCGNGNFSLALARNFNRVLATEI
AKPSVAAAQFNIAANQIDNVQIIRMAAEEFTQAMLGVREFNRLKGIDLTSYQCETIFVDP
PRSGLDQQTVKMVQAYSRILYISCNPETLCENLLTLSQTHKISRLALFDQFPYTHHMECG
VLLEKRV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagagatgctgcctaccgaccaatacgatgcccagttggcagagaagaaacat
cgattaatttcgatgatggcgccttattcagcgcctgagccggaagtatttcgctcaccg
cttagccattatcgtatgcgggcagaatttagaatctggcaccaaggggatgacctgtac
cacatcatgttcgatcaggcgaccaaacagcgtattcgggttgatgtttttcctgccgcc
agtgaactgattaaccgactgatgccagaactgttagccggtgtaaaacctcatgcttca
ctacgtcataagctattccagattgattatctctccaccctcagcggtgaaattgtagtt
tccctgctttatcatcgtcaactggacgacctgtggttacagcatgcggagcaattaaga
gacgacttgcgttctcgtgggtttaatttgcagttaatcggtcgggcatcgaaacaaaaa
atctgtctggatcgagattatgttgatgaacgcttaccggtaggcggacaagagatgatc
tatcgccaaacagaaaatagcttcactcaacctaatgcggctgtaaatattcatatgctg
gaatgggcaatcgatgtcactcagggctcaaaaggcgacttattagaattatattgtggt
aacggcaatttttctttagcactggctcgcaatttcaaccgggtgctggcgacagaaatc
gctaagccatcagtagctgccgcccaatttaatattgccgccaaccaaattgataacgtg
caaattattcgtatggcagcagaagaatttactcaggccatgttgggggtcagggaattt
aatcgactgaaaggcattgatttaaccagctatcaatgtgaaaccatttttgtcgaccct
ccccgcagcggattggatcaacaaacggtgaaaatggtacaggcttactcgagaatcctc
tatatctcctgtaacccggaaaccctgtgtgaaaatctactcacgcttagtcaaacacat
aagatttctcgactggcactgttcgaccagttcccctatacccaccatatggaatgcggc
gttctgttagaaaaacgagtctga
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