Limnobaculum zhutongyuii: EKN56_00940
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Entry
EKN56_00940 CDS
T06157
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00521
Streptomycin biosynthesis
prag00523
Polyketide sugar unit biosynthesis
prag00525
Acarbose and validamycin biosynthesis
prag00541
Biosynthesis of various nucleotide sugars
prag01100
Metabolic pathways
prag01110
Biosynthesis of secondary metabolites
prag01250
Biosynthesis of nucleotide sugars
Module
prag_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
prag_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EKN56_00940 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EKN56_00940 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
EKN56_00940 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EKN56_00940 (rffG)
00525 Acarbose and validamycin biosynthesis
EKN56_00940 (rffG)
Enzymes [BR:
prag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EKN56_00940 (rffG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Sacchrp_dh_NADP
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QBH95105
UniProt:
A0A411WFU3
LinkDB
All DBs
Position
294007..295074
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AA seq
355 aa
AA seq
DB search
MRKILVTGGAGFIGSAVVRHIIQDTKDSVLVVDKLTYAGNLDSLVEVSDSGRYSFEQVDI
CDRSALDRLFTQYQPDLVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWMGLD
TALKQAFRFHHISTDEVYGDLHGTTDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGF
PTIVTNCSNNYGPYHFPEKLIPLIILNALEGKALPVYGNGAQVRDWLFVEDHARALYKVV
TEGVVGETYNIGGHNERKNIEVVRTICQLLEELAPSKPDGVAKYEDLITYVTDRPGHDMR
YAIDASKIERELNWKPLETFESGIRKTVSWYLTNQAWWQRVQDGSYARERIGLKS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaagattttagtcactggcggggccggttttattggttctgcggtagtgagacac
attattcaggataccaaagatagcgtattggtggttgataaactgacttatgccggaaat
ctcgactcattggtggaagtgtctgacagtggccgctactcttttgagcaagttgatatt
tgtgacagatctgcgctggatcgtctttttactcagtatcagccagacttagtgatgcat
ctggcagcagagagtcatgtcgatcgctctattgatggtccggcagcgtttattgaaacc
aatattgttggaacttatacactgctggaagcagcccgtcactattggatggggttagat
actgcactgaagcaagcatttcgctttcatcatatctctactgatgaagtgtatggtgat
ttacatgggactacggacttgtttactgaaacaacgccttatgcgccaagcagtccttat
tcagcgtctaaagcctctagtgatcatttggtcagagcctggctacgtacctatggcttc
ccaactatcgtgactaactgttctaataactatggaccatatcattttcctgagaaactc
attcctctgatcattttgaatgcattagaagggaaagcattaccggtttatggtaatggc
gctcaggtcagggactggttatttgttgaggaccatgcaagggctttatataaggtcgtc
actgaaggtgttgttggtgaaacctacaatattggtggtcataatgagcgcaaaaatatt
gaagttgtgcgcactatttgccagttattggaagagttagcaccatcaaaacctgacggt
gtggctaaatatgaggatctgattacctatgtaacggatcgccccggccatgatatgcgc
tatgccatcgatgccagtaaaattgagcgagaattgaactggaagccgctggaaaccttt
gaatcaggtattcgtaagacagtctcctggtatctgacgaaccaagcgtggtggcagcga
gtccaggatggaagttatgccagagaacgcattggtttgaaatcatag
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