Limnobaculum zhutongyuii: EKN56_03260
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Entry
EKN56_03260 CDS
T06157
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
prag
Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prag03036
]
EKN56_03260 (xerD)
Chromosome and associated proteins [BR:
prag03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EKN56_03260 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QBH95510
UniProt:
A0A411WGT5
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All DBs
Position
813899..814798
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AA seq
299 aa
AA seq
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MAQDNTILIEQFLDALWLERNLAENTLASYRLDLRALSEWLHAHDLTLENAQALDLQSFL
ADRVDGGYKATSSARMLSAMRRLFQYLYREKIRSDDPSALLSSPKLPQRLPKDLTESQVE
SLLQTPRTEEPIELRDKAMLEVLYATGLRVSELVGLTISDVSLRQGVVRAIGKGDKERLV
PLGEEAVYWLEQYLQYSRPWLINGGTLDILFPSKRGQKMTRQTFWYRIKHYAVLAGIDSE
ALSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggataacacaattctgattgaacaatttctggatgcgctctggctggaacgc
aatctggcagagaacacgctggcatcttaccgtctggatttacgggcgttaagcgagtgg
ttacacgcccacgacctgacgctggagaacgcgcaggcactggatttgcaatcgtttctg
gctgacagggttgatggcggatataaggcaaccagttctgcgcggatgttaagcgccatg
cggcgactgtttcagtatctgtatcgtgaaaagatccgcagcgacgacccttcagcgttg
ctgtcttcgccaaaactaccacagagattgcctaaagatttaaccgaatctcaggtagaa
tctctgctgcaaacccctcgcactgaagagcccatcgagctgcgcgataaagccatgctg
gaagtgctgtacgcgaccgggctgcgggtgtctgaactggtaggactcactatcagcgat
gtcagtctgcgtcagggcgtcgttcgggccattggtaaaggtgataaagaacggctggtt
cctctgggggaagaggcggtttactggcttgaacaatatcttcagtacagtcgaccatgg
ttgatcaatggcggcacactggatattctgttccccagcaaacgcgggcagaaaatgacc
cgccagacattctggtaccggattaaacattatgcggtgctggcaggtatcgacagtgag
gcactttcacctcacgtattgcgtcatgcatttgcgacacatttattgaaccatggtgca
gatttgcgtgtcgtacagatgctattaggtcacagtgatttgtcgaccacccagatttat
actcatgtagcaaccgaacggttgaaacagttacaccaacagcaccatccccgggcctaa
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