Limnobaculum zhutongyuii: EKN56_04970
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Entry
EKN56_04970 CDS
T06157
Symbol
ompC
Name
(GenBank) porin OmpC
KO
K09476
outer membrane pore protein F
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag01501
beta-Lactam resistance
prag02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKN56_04970 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKN56_04970 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prag02000
]
EKN56_04970 (ompC)
01504 Antimicrobial resistance genes [BR:
prag01504
]
EKN56_04970 (ompC)
Transporters [BR:
prag02000
]
Other transporters
Pores ion channels [TC:
1
]
EKN56_04970 (ompC)
Antimicrobial resistance genes [BR:
prag01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
EKN56_04970 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
QBH98677
UniProt:
A0A411WR68
LinkDB
All DBs
Position
1174821..1175903
Genome browser
AA seq
360 aa
AA seq
DB search
MKRKILAVIVPALLVAGAANAAEVYNKDGNKLDITGKIQGSHYFSDDKGNDGDKTYARFG
LRGETQVSDQVVGYGYYQTELNASKQENNGGNTQKTRLAYAGIKAGDAGSFDYGRNYGVL
YDIGGWTDVLPEFGGDSYQQTDVFMTQRAGNLATYRNKNFFGMVDGLNFAVQYQGRNDSG
DRNGSDRNGDGWGLSSVYNLGNGLSLGAAYASSDRTDLQTGDLRGDRANAATGGIKYDAN
NIYLAAMYSQTYNMTRFGTSNNYVANKAQNIEVVAQYQFDFGLQPSLAYVQSKGKDLDYV
GYGSSQDLVKYVDVGATYYFNKNISTKVDYKINLIDDSKFTDAAGISTDDIVAVGIVYQF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaaaattttagcagtgatcgtaccagctctgttagttgctggtgcagcaaac
gcagcggaagtgtataacaaagatggtaacaagttagacattaccggcaagattcagggt
tctcactatttctctgacgacaaaggcaacgacggcgacaaaacttacgctcgtttcggt
ctgcgtggtgaaacccaagttagcgatcaagtagttggttatggttactaccaaaccgag
ctgaacgctagcaagcaagaaaacaacggtggcaacactcaaaaaactcgtctggcatat
gctggtattaaagctggtgatgcaggttctttcgactacggtcgtaactacggcgttctg
tatgacatcggcggctggactgacgttctgccagaattcggtggcgacagctatcagcaa
actgacgtattcatgactcagcgtgctggtaacctggctacttaccgtaacaagaacttc
ttcggtatggttgatggtctgaacttcgctgttcagtatcaaggccgtaacgattctggc
gaccgtaacggttctgaccgtaacggcgacggctggggtctgtcttctgtatataactta
ggtaatggtctgtctttaggtgctgcttacgcttcatctgaccgtaccgatctgcaaacc
ggtgacctacgtggcgaccgcgctaacgcagctaccggtggtatcaaatacgatgcgaac
aacatctatttagccgctatgtacagccagacttacaacatgactcgttttggtaccagc
aataactacgttgctaacaaagcgcaaaacattgaagttgtagctcagtaccagttcgat
ttcggtttacagccatctttagcttacgttcagtctaaaggtaaggacttggattatgtt
ggttacggtagtagccaggacttagtgaaatatgttgatgttggtgctacttactacttc
aacaaaaacatctctactaaagttgactacaaaatcaacttaattgatgacagcaagttc
actgatgccgctggtatctctactgatgatatcgtagctgttggtatcgtttaccagttc
taa
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