Limnobaculum zhutongyuii: EKN56_05130
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Entry
EKN56_05130 CDS
T06157
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EKN56_05130
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prag01007
]
EKN56_05130
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prag03016
]
EKN56_05130
Enzymes [BR:
prag01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
EKN56_05130
Amino acid related enzymes [BR:
prag01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
EKN56_05130
Transfer RNA biogenesis [BR:
prag03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EKN56_05130
Prokaryotic type
EKN56_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
QBH95838
UniProt:
A0A411WHV0
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All DBs
Position
complement(1218152..1219444)
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AA seq
430 aa
AA seq
DB search
MLDPNLLRNELDATAEKLARRGFKLDVDTLRKQEERRKVLQVETESLQAERNARSKSIGE
AKARGEDIEAVRREVNLLGEKLDAAKSELEQLQSEIHNSVSLIPNIPDESVPFGKDEHDN
LEVSRWGEPRKFDFPIRDHVDLGESSGGLDFAAAVKLTGARFVVMKGQIARMHRALAHFM
LDLHTTQHGYMETYVPYLVNQATLFGTGQLPKFGEDLFHTKPLTEEAETSNYGLIPTAEV
PVTNLVRDEILDEDQLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRPED
SMNALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSRKTYDLEVWVPAQNTYREISSCS
NMWDFQARRMQARYRGKSDKKTTLVHTLNGSGLAVGRTLVAILENYQQADGRIEVPEVLR
PYMGGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctggacccgaatttattacgtaatgagctagacgcaactgctgaaaaactggctcgc
agaggttttaaactggatgtagatactttacgtaagcaggaagagcgccgtaaggttttg
caggttgaaacagaatcattacaagctgaacgtaatgcacgatcgaagtctatcggtgaa
gctaaagctcgcggtgaagatattgaagcggtgcgtcgtgaagttaacctgttgggcgaa
aagctggatgctgctaaatccgagcttgagcagttacagtcagagattcacaattcggta
tcccttattcctaatattcctgatgaatcagtgccatttggtaaagatgaacatgacaat
ctggaagtcagccgttggggagagccgcgcaaatttgatttccctattcgcgatcatgtt
gatttaggtgaaagcagcggtggattagattttgctgccgcagttaagctgaccggtgcg
cgctttgtggtgatgaaagggcaaattgcccgtatgcaccgcgctctggctcactttatg
ttagacctgcacacgactcaacatggctatatggaaacttacgttccctatctggttaat
caggcgacgttgtttggtaccggacaattgcctaagtttggtgaagacctgttccacacc
aaaccactgacagaagaagccgaaaccagtaactatggtttgattcctaccgcagaagtt
ccggttactaacctggtacgtgatgaaattctggatgaagatcagttgccattgaagatg
accgctcatacaccatgtttccgctcagaggcgggttcatatggtcgtgatactcgtggt
ctgattcgtatgcaccagtttgataaagttgagctggtacaaatcgttcgtcctgaagac
tctatgaatgcattagaagagttgactggtcacgcagaaaaagtgttgcagttactgggt
ctgccttaccgtaaagttttactttgtaccggtgatatgggctttggctcaagaaaaact
tacgatctggaagtttgggttccggcacagaatacatatcgtgagatttcttcatgttct
aacatgtgggatttccaggctcgtcgtatgcaggcgcgctatcgcggtaagagtgataag
aaaactacgctggttcataccttaaatggttcaggtctggcggtgggtcgtactctggtt
gcgatactggaaaactatcaacaggctgatggccgtattgaagtgccagaagtgctgcgt
ccatatatgggcggtctggaatatatcggctga
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