Limnobaculum zhutongyuii: EKN56_05420
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Entry
EKN56_05420 CDS
T06157
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKN56_05420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prag03400
]
EKN56_05420
Enzymes [BR:
prag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
EKN56_05420
DNA repair and recombination proteins [BR:
prag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EKN56_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QBH95890
UniProt:
A0A411WHY1
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All DBs
Position
1299439..1300296
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AA seq
285 aa
AA seq
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MKFVGAHVSASGGLDQAVIRAHELEATAFALFTKNQRQWRAAPLTEEVISDFRSACEQYH
YSSAQILPHDSYLINLGHPVEEALQKSRDAFIDEMERCQQLGLTLLNFHPGSHLMQIDED
ECLKRIAESINIALDRTQNVVAVIENTAGQGSNLGFKFEHLAAIIDDVEDKSRVGVCIDT
CHAFAAGYDLRTEDDCEKTFTRFSDIVGFNYLRGMHLNDAKSEFGSRVDRHNSLGEGNIG
KTVFSYIMRDERFDNIPLILETINPDIWKDEIAWLKSQQKVAEAV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgttggcgcacacgttagtgcatctggtggattagatcaggcagttatccga
gcccatgagcttgaggcaaccgccttcgcgctgtttaccaaaaaccagcgccagtggcga
gcggcaccactaaccgaagaggtgatatctgattttcgcagtgcttgcgagcaatatcac
tatagctccgctcaaattttacctcatgacagctatttgattaatcttggccatccggta
gaagaggccttgcagaaatcccgtgatgccttcattgatgaaatggaacgctgccaacag
ttaggcctgacgttgttgaactttcaccccggcagccatctgatgcagattgatgaagat
gaatgccttaaacgcatagctgaatctattaatattgcgttagaccgaacccaaaacgtt
gttgctgtaatagaaaacaccgctggtcagggcagtaacttaggttttaagtttgaacat
ctggccgccatcattgatgatgttgaagataaaagtcgggttggtgtctgtattgatacc
tgtcatgcttttgcggcaggttatgacctgcgaactgaagacgattgtgagaaaaccttt
actcgtttcagcgatatcgttggatttaattatctgcgtggcatgcacctgaatgacgct
aaaagcgagtttggcagccgggttgaccgccataacagtctgggtgaaggaaatatcggc
aaaaccgttttcagctacattatgcgtgatgaacgttttgataatattccactgattctg
gaaaccattaatccggatatctggaaagatgaaatagcttggttaaagagccaacagaaa
gtggctgaggctgtttga
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