Limnobaculum zhutongyuii: EKN56_07050
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Entry
EKN56_07050 CDS
T06157
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00450
Selenocompound metabolism
prag00970
Aminoacyl-tRNA biosynthesis
prag01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
EKN56_07050
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EKN56_07050
Enzymes [BR:
prag01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
EKN56_07050
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Motif
Pfam:
SelA
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
ydhR
Motif
Other DBs
NCBI-ProteinID:
QBH96173
UniProt:
A0A411WJ04
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All DBs
Position
1615901..1617013
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AA seq
370 aa
AA seq
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MQSIYEKYHLKNVINASGRMTALGVSTPKPEVVDVVSYGLNQYFEIKDLVNKTGEYIAKL
LGVENAVVVSCASAGIAQSVAAVIVKDDSDLLLNLHSSDKVVPREIIVPKGHNVNFGAPV
DTMISLGGGKVIEAGFANECSAAQVEAKITPQTAAILYIKSHHTVQKSMLTVSDAAAVAK
KHNLPLIVDAAAEEELTAYYNMGADLVIYSGAKAIEGPTSGLVIGKKQYVEWVKQQSSGI
GRAMKVGKEGILGLTLAIELYLTAKKETGQEMVEKMTPFIHDLNAIPGISAKVVWDAAGR
DIARTEISFDEQAIGKNTFEIMKLLKQGDTAIYFREYKANEGKVEADVRSVSAPQLDVIS
SSIRKLVTGA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatttatgagaagtatcacttaaagaatgtgattaatgcttcaggcagaatg
accgcattaggtgtttctacccctaaacccgaagtggttgatgtggtttcttacgggctg
aaccaatattttgaaattaaggatctggtcaataagaccggcgaatatattgccaaactg
ctgggcgttgaaaacgcagtcgtggtgtcctgtgcttctgctggtattgctcagtctgtt
gccgcggtgattgtgaaagatgacagcgatctgctgttaaacctgcacagctccgataaa
gttgttcctcgtgaaatcattgttcctaaagggcacaacgtaaactttggtgcgccggtt
gataccatgatttctctgggcggcggtaaagtcatcgaagccggttttgccaatgagtgc
agtgcagctcaggttgaagcgaaaattacgccgcaaactgccgctattttgtatatcaaa
tctcaccatacggtacagaaaagtatgctgaccgtatctgatgccgcagcggtagctaaa
aagcataacttacctttaatcgttgacgcagcagcggaagaagaactgaccgcttattac
aatatgggcgcggacttagttatctacagtggcgctaaagcgattgaaggaccaaccagc
ggtctggtgattggtaaaaagcaatatgttgaatgggtcaagcagcaaagcagcggtatt
ggacgtgcgatgaaagtaggtaaagaaggcattcttggcctgacgctggcaattgaactc
tatctgacagcgaaaaaagagaccggtcaggaaatggtggagaaaatgaccccgtttatt
catgacctgaatgcgattccgggtatctccgccaaagtggtatgggatgccgccggacgc
gatatcgccagaacggaaatctcttttgatgagcaagccattggcaagaatacattcgaa
ataatgaaactgttaaagcagggcgataccgctatttatttccgcgaatacaaagcgaat
gaaggcaaagttgaggctgatgtgcgtagcgtatccgcaccgcagttagatgttatttct
tcttctattcgtaaattggttaccggagcataa
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