Limnobaculum zhutongyuii: EKN56_08820
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Entry
EKN56_08820 CDS
T06157
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00061
Fatty acid biosynthesis
prag00071
Fatty acid degradation
prag01100
Metabolic pathways
prag01212
Fatty acid metabolism
prag02024
Quorum sensing
prag04146
Peroxisome
Module
prag_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EKN56_08820 (fadD)
00071 Fatty acid degradation
EKN56_08820 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EKN56_08820 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKN56_08820 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prag01004
]
EKN56_08820 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prag04147
]
EKN56_08820 (fadD)
Enzymes [BR:
prag01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EKN56_08820 (fadD)
Lipid biosynthesis proteins [BR:
prag01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EKN56_08820 (fadD)
Exosome [BR:
prag04147
]
Exosomal proteins
Exosomal proteins of breast milk
EKN56_08820 (fadD)
Exosomal proteins of breast cancer cells
EKN56_08820 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Phage_Cox
Motif
Other DBs
NCBI-ProteinID:
QBH96496
UniProt:
A0A411WJY7
LinkDB
All DBs
Position
complement(2006576..2008264)
Genome browser
AA seq
562 aa
AA seq
DB search
MNKVWLSRYPKDVPAEIDPQRYSSLADMFENAVNRFADQPAYINQGKVMTFRRLEKRSRA
FAAYLQNSLGLKKGDRVAVMMPNLLQYPIVLFGILRAGMVVVNVNPLYTPRELEHQLNDC
GAKAIVIVSNFAHTLEKVVKQTQIEHVILSGLGDQLSVGKRSLVNFVVKYIKKLVPKYNL
PGAISFRSALHKGRNQQYIKPRLSPDDLALLQYTGGTTGVAKGAMLTHGNLLANMEQARA
AYIPLLIVGQELVVTALPLYHIFALTVNCLLFLEVGGCNLLITNPRDLKGMVKELSRYPF
SALTGVNTLFNALINDEDFRELDFSHLRITVGGGMSVQRSVADRWEQLTGTHLLEGYGLT
ECSPLVAGNPYDLQQYSGSIGLPVASTEIRLVDDQGVDVPEGQAGELWVKGPQVMKGYWN
RPEATNEVLKDGWLATGDIVVMDEQGFMKIVDRKKDMILVSGFNVYPNEIEEVVASHAKV
LEVAAIGVPNEVSGETVKIYVVKRDPSLTKDELLAHCRSGLTGYKIPRIVEFRDELPKSN
VGKILRKDLRDEAIKQQAGNQQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaggtttggttatcccgttatcccaaagatgttccggcagagatagaccctcaa
cgttactcatcactggcggatatgtttgaaaatgcggtaaatcgctttgccgatcagcct
gcttatattaatcaggggaaggtgatgaccttccgtcgattagagaagcgtagtcgggct
tttgctgcctacctgcaaaattcactgggattgaaaaaaggtgatcgggtagcggtaatg
atgccgaacctgttgcaatatcctatcgtgctgtttggtattctgcgtgcgggtatggtg
gtggttaatgtgaacccactgtataccccgagagagttggaacaccagctaaatgactgt
ggtgcaaaagcgattgtgattgtgtccaactttgcccatacgctggaaaaagtggttaag
cagacgcaaattgagcatgtgattctcagcggcctgggcgatcagctctccgttggcaaa
cgctctctggttaactttgtcgttaagtacattaaaaaattggtgccgaaatacaatttg
cccggcgcaatatcatttcgcagtgctttacataaggggcgtaatcagcagtatattaaa
ccgcgattatcacctgacgatctggctttgctgcaatataccggtggaaccaccggtgtg
gccaaaggcgcaatgctcactcacggtaacctgttggcgaatatggaacaggcccgggcc
gcttacattccactgttaatcgtgggacaggaactggtggtaacggctctgccgctttat
cacatttttgctttaaccgtaaactgcctgctatttcttgaggtggggggatgcaacctg
ctcattactaatccacgtgatttaaaaggcatggtgaaagagctttcccgttatccattc
tccgctctgaccggggtgaatacgctgtttaatgcgctcatcaatgatgaagatttccgc
gagttggatttcagtcacctgcgtattaccgttggtggcggtatgtcggttcagcgtagc
gtcgcagatcgttgggagcaattaacaggaactcatttgctggaaggttatggtctgact
gagtgttcgccattagttgccggtaatccttatgatttgcagcaatacagtggcagtatc
ggtttaccggtagcctctacggaaattcgcctggttgacgatcagggggttgatgtacca
gaaggacaagcgggtgagctttgggttaaagggccacaggtaatgaaaggctactggaat
cgccctgaagccaccaacgaagtgttaaaagacgggtggctggcaaccggtgatattgtc
gtgatggacgaacagggatttatgaaaatcgtcgatcgtaaaaaagatatgattttggtt
tccggatttaacgtttatcctaatgaaattgaagaagtggtagccagccacgctaaagta
ctggaagtggctgccattggcgtacccaatgaggtttccggcgaaactgtgaaaatttat
gtggttaaaagagatccgagtttaactaaggatgaacttttagcccattgccgcagtgga
ttaactggttataaaattccgagaattgttgaatttcgtgatgaattgcctaagtctaac
gtgggtaagatcctacgtaaggatctgcgcgacgaagccattaaacagcaagcgggtaat
cagcagtaa
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