Limnobaculum zhutongyuii: EKN56_10970
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Entry
EKN56_10970 CDS
T06157
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
prag
Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prag01011
]
EKN56_10970 (rlpA)
Enzymes [BR:
prag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EKN56_10970 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
prag01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EKN56_10970 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QBH96873
UniProt:
A0A411WKW8
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All DBs
Position
2457585..2458652
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AA seq
355 aa
AA seq
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MRKQWLWICAMGFMLAACESTPPPPKTPTLPPLPHSGPATEISGVEPRYEPYNIGTMKDY
KVRGKSYRIITQPENFSEEGLASWYGQELHGNKTATGEIFDAYELSAAHPTLPLPSYVRV
TNLSNGRQLVVRVNDRGPFTKGRVIDLSKAAADRLNITGQTKVRLDAIVVSPNGQLSGPG
TIGSTVAKRSYELQSRPLIGNQVISTPQQSLSAQQEVRVNIPAQPDNRIAIPTPADNNHN
VLLSAPSQAERVNIPATPNSTVSVPASPDRDNAQSVNATSTGFLVQVSAVNDRQRAIEVQ
KRLSSQLNVPGMVSDGGAYYRIQLGPFSTREQAQELQQRLASQGQPNSIILVAAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaacagtggctatggatttgtgcaatgggtttcatgctggcggcttgtgagtca
acgcctcccccacctaaaacaccaacattgccacctttacctcattccggaccggcaact
gaaattagcggtgtagaaccccgttatgaaccttataatattggcacgatgaaagattat
aaggtgagaggaaaaagctaccgtattatcactcagcctgaaaactttagcgaagagggt
ctggcaagctggtatggtcaggagctacatggaaataaaacggcaaccggcgaaatcttt
gatgcctacgagttaagtgcagctcatcctactctgcctcttcccagttatgtacgtgtg
actaatttaagtaatggtcgtcaattagtagtacgcgtgaacgatcgtggtccctttacc
aaaggccgggtcatcgatttatccaaagctgctgccgatcgcctgaatattaccggccag
actaaagtgagactggatgcgatcgttgtgtcaccaaacggtcaactatcaggcccggga
actatcggttcaaccgttgcaaagcgctcttatgagctccagagtcgtccattaattggc
aatcaggtgatatctactccccaacaaagcctgagcgctcagcaagaagtgcgcgtaaat
attcctgcacaaccggacaatcggatagcaatacctacccccgcagataataaccataat
gtattgctcagtgcaccaagccaggctgaaagggtaaatattcccgcgacgccaaattca
accgtcagtgtgccagcctctcccgacagggataatgcgcaatcggtcaacgcaacatct
accggttttctggttcaggttagtgcagtgaatgaccgccagagagccattgaagtacaa
aaaagattaagcagtcaactgaacgtacctggaatggtgtctgatggcggagcgtactat
cgtatccagttaggccctttcagtaccagagaacaagctcaagaattgcaacaacgttta
gcaagccagggacagcctaatagtattattttggtggcagcgcgctaa
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