KEGG   Limnobaculum zhutongyuii: EKN56_11880
Entry
EKN56_11880       CDS       T06157                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
prag  Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:prag00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prag02044]
    EKN56_11880 (tssC)
Secretion system [BR:prag02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EKN56_11880 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QBH97033
UniProt: A0A411WLD3
LinkDB
Position
2645880..2647367
AA seq 495 aa
MSIAEQNVAADSKEQALSSMSLLDQIASQTNYSPADESYDIAKQGIATLVSHLLDTGNTE
EPVNKQLVDRMIAELDKKLSVQLDEILHNQELQKMESSWRGLKLLIDRTDFRENIKINLL
YVTKDEMLEDFEFAPEITQSGLYKHVYSAQYGQFGGEPIGAILADYQFLPNAPDIKLLQY
TSAVGAMAHTPFISSAAPQFFGIDSYTQLDSIKELSSVFESPTYTKWRSLREAEDSRMLG
LLTVRNLARLPYSPMDNPVKSFGYEEDVSHNHEHYLWTNAVYAFGTRLTDSFAQYRWCPN
IIGPESGGAVEDLPVHVFEAMGELQTKIPTETLITDRREFELAEEGFIALTMRKGSDNAA
FFSAQSVQKPLKFPNTDEGKAAETNSKLGTQLPYIMLSTRIAHYLKVIQREKLGSYQEAA
DVERNLNTWLKQYVSDQENPPVDVRCRRPFRAISLTVSDVPGEPGWVKTRLLLRPHLKSM
GSYTELSLVGRLDKE
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgtctatagctgaacaaaatgttgccgctgattccaaagagcaagcgcttagctccatg
agcctgttggatcagattgcctcccaaaccaactactcaccggctgatgaaagctacgat
attgctaaacagggtatcgctacattagtttctcatcttctggatacgggaaataccgaa
gaacccgttaataaacagctagttgatcgaatgattgccgagctggataaaaaacttagt
gtccagcttgatgaaattttgcataaccaagaactgcaaaaaatggaatcttcatggcgc
ggtttaaaactgttaattgaccgtaccgatttcagagaaaacatcaaaatcaacctgctg
tatgtaaccaaagacgaaatgctggaagatttcgagtttgcgcctgaaattactcagtct
ggtttatataagcacgtttactcagcacaatatggtcagttcggtggtgaacctattggc
gctattctggcagattatcagttcttacctaatgcgccagatatcaagctgctgcaatac
acgtctgcagtaggggcaatggcgcatacgccattcatctcttctgccgcacctcagttc
tttggcattgatagctatacccagttagacagcatcaaagaactaagctcggtatttgaa
agcccgacttacaccaaatggcgctctctacgtgaagccgaagactccagaatgctgggc
ctgttaaccgtaaggaatctggctcgtctgccctattctccgatggataatccggtgaaa
agcttcggttatgaagaggacgttagccataatcatgagcattatctctggaccaatgcc
gtatacgcatttggtacccgtttaaccgatagctttgctcaataccgctggtgtccgaat
attattggaccagaaagcggcggtgccgttgaagatctgccggtacacgtatttgaagcc
atgggtgaattgcaaaccaagatcccaacagaaacgctgattaccgaccgccgtgaattc
gaactggctgaagagggctttattgcgctgaccatgcgtaaaggttcagataatgctgcg
ttcttctctgctcagtcggtacaaaaaccgttgaaattcccgaatactgacgaaggtaaa
gcggcagaaaccaacagcaagctagggactcaattaccttacatcatgctgtctacccgt
attgcccactatctgaaagtgattcaacgcgaaaaactcggttcttatcaggaagccgcc
gatgtggaacgcaacctgaatacctggctgaagcagtatgtttccgatcaggaaaatcca
ccggtagacgttcgctgccgtcgtccattccgcgctatcagcttaaccgttagcgatgtt
ccgggcgaaccaggctgggtgaaaacacgtctgttacttcgtccacatctgaaaagcatg
ggttcatacactgagctctcgctggtaggacgcctggacaaggagtaa

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