Limnobaculum zhutongyuii: EKN56_12220
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Entry
EKN56_12220 CDS
T06157
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
prag
Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prag03021
]
EKN56_12220 (rpoS)
Transcription machinery [BR:
prag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EKN56_12220 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QBH97089
UniProt:
A0A411WLH3
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All DBs
Position
complement(2751914..2752903)
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AA seq
329 aa
AA seq
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MSSNTLKVNEWPENAEFDENEPTEFDEKAQLDIVEEDSSTDDILLSQDVTQHVLDATQLY
LGEIGFSPLLTAQEEVYFARRALRGDAAARSRMIESNLRLVVKIARRYNNRGLALLDLIE
EGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRT
ARELSQKLDHEPRAEDIALQLDKSVGDVSRMLRLNERVTSVDSPLNGESDSALLDILPDE
NNNDPEYTTQDNDIKQSIVKWLFELNPKQREVLARRFGLLGYEAATLEDVGAEIGLTRER
VRQIQVEGLSQLREILVKQGLNIEALFQE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaatacgctgaaagtcaacgaatggcctgaaaatgccgaattcgatgaaaat
gaacccacggagttcgacgaaaaagctcaactggatatcgtcgaagaagatagctccacg
gatgacatactgctttcacaagatgtgactcaacatgtgctggatgcgacacagctgtat
ctcggagaaattggtttttcacctttattaaccgcgcaggaagaagtctattttgcccgg
cgggcattacgtggcgatgccgctgcccgcagtcgtatgatagaaagtaacctgcgtttg
gttgttaaaattgctcgtcgatataacaatcggggccttgctctgcttgatcttatcgaa
gagggcaatttgggtcttattcgtgcggtagaaaagtttgatcctgaaagagggttccgt
ttttctacttatgcaacttggtggattcgtcaaaccattgaacgcgccatcatgaatcag
accagaactatccgcttgccgattcatattgttaaagagctgaatgtctatttgcgtact
gcccgtgagctgtctcaaaagctggatcacgagccgcgtgcggaagatatcgcgcttcaa
ctggataaatcagtgggtgatgttagtcggatgctacgccttaacgagcgtgtgacttct
gtggactcaccattaaatggtgaatcagatagcgcattgttagatatcctaccggatgaa
aataacaatgatcctgaatataccactcaggataacgatattaagcagagcattgttaag
tggttatttgaactgaatccaaagcagcgggaagtattagctcgtcgtttcggcctgtta
ggttatgaagcggcaactctggaagatgtcggcgcagagatcgggttaacccgtgaacgc
gttcgtcaaattcaggtagaagggctgagccaactgcgtgaaatcctggtgaaacaaggg
ctgaatattgaggcgctgtttcaggaataa
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