Limnobaculum zhutongyuii: EKN56_12430
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Entry
EKN56_12430 CDS
T06157
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKN56_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prag03400
]
EKN56_12430
Enzymes [BR:
prag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EKN56_12430
DNA repair and recombination proteins [BR:
prag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKN56_12430
Prokaryotic type
EKN56_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBH97126
UniProt:
A0A411WLV8
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All DBs
Position
2799844..2800521
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AA seq
225 aa
AA seq
DB search
MSDKLTWHDVIGQEKQQPYFQDTLKFVACERAAGKVIYPPQKDVFNAFSSTELADIKVVI
LGQDPYHGPNQAHGLSFSVLPGIQPPPSLVNMYKELMTDIPGFQRPNHGYLQSWAEQGVM
LLNTVLTVEAGKAHSHASLGWETFTDKVIASINEHRDGIVFMLWGSHAQKKGRIIDRQRH
HVLTAPHPSPLSAHRGFLGCKHFSQANTLLEQQGLTPIRWQLDNL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaactgacatggcacgatgttattggtcaggaaaaacagcagccctacttt
caggacaccctcaagtttgtcgcttgtgaaagagcggctggaaaagtgatctaccctcca
caaaaagatgttttcaatgcgttcagttcaacagagttggcagacatcaaagtggtgata
ctgggtcaggatccttatcacggccctaatcaggcacacggtctgtcattttcagtatta
ccgggaatccaaccaccgccgtcactggtcaatatgtataaagaacttatgaccgatatt
cccggttttcaacgcccaaaccatggttatttgcaaagctgggcggaacaaggggtgatg
ttacttaataccgtactcaccgttgaggctggtaaagcgcactcccatgccagtttaggt
tgggaaacgtttaccgataaggtgattgcatctatcaacgaacatcgtgatggaattgtc
tttatgttatggggttctcatgcgcaaaagaaaggacggattatcgaccgtcaacgccat
cacgtactgacagcacctcacccatcccctttatctgctcatcgcggtttccttggctgt
aagcacttctctcaggcgaatacattgttagaacagcaaggtttaacacctattcgctgg
caattagataacctttaa
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