Limnobaculum zhutongyuii: EKN56_12775
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Entry
EKN56_12775 CDS
T06157
Name
(GenBank) hypothetical protein
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag03030
DNA replication
prag03430
Mismatch repair
prag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKN56_12775
03430 Mismatch repair
EKN56_12775
03440 Homologous recombination
EKN56_12775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prag03032
]
EKN56_12775
03400 DNA repair and recombination proteins [BR:
prag03400
]
EKN56_12775
Enzymes [BR:
prag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKN56_12775
DNA replication proteins [BR:
prag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKN56_12775
DNA repair and recombination proteins [BR:
prag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKN56_12775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
QBH97190
UniProt:
A0A411WM10
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All DBs
Position
2858517..2859083
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AA seq
188 aa
AA seq
DB search
MKIKSAMLRAALVCVAKNDARYYLNGIHITPKYIEATNGHVALRLEHGINTRRNIIVQFI
GHIPVRADMTELTFGKSLLATHYDAHGQRIGFTAIKLLDGRFPDLDRVVPTMVDHNINPV
VQAGLLSYPEKMFGRERKFIPMQLLPSGKESAVLIKFDTTVNSMYGNPKFVVMPCRDSAF
EVVKEFLG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaatctgcaatgctccgtgcagcgctggtatgcgttgccaaaaatgacgcc
cgctattatttaaatggtattcacattacgcctaaatatattgaggcaactaatggtcac
gttgccttacgtcttgaacacggtattaacactcgccgaaatatcattgttcagtttatt
ggtcacattcctgttagggccgacatgaccgagttgacattcgggaagtcactgcttgcg
acgcattatgacgctcatggacaacgtatagggtttaccgccataaagctgctggatgga
cgttttcccgatctggatcgcgtcgtaccaacaatggtagaccacaacatcaaccccgta
gtccaggctggacttcttagttacccagagaagatgttcgggcgagaacggaaatttatc
cctatgcagttgctgccatcaggcaaagagagcgccgttctcatcaaattcgatacgaca
gtcaatagcatgtatggcaatccaaagtttgtcgtaatgccctgccgtgatagtgccttt
gaagtagttaaggagttcttaggatga
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