Limnobaculum zhutongyuii: EKN56_14815
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Entry
EKN56_14815 CDS
T06157
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
prag
Limnobaculum zhutongyuii
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prag03400
]
EKN56_14815 (phrB)
Enzymes [BR:
prag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EKN56_14815 (phrB)
DNA repair and recombination proteins [BR:
prag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EKN56_14815 (phrB)
Prokaryotic type
EKN56_14815 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBH97561
UniProt:
A0A411WMT8
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All DBs
Position
complement(3293569..3294990)
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AA seq
473 aa
AA seq
DB search
MASHLMWFRADLRVHDNLALAAACRSDDTEVLALFIAPLKQWQQHDMAPRQAAFLQSQLN
ALQQALAERGIPLLVKQVDDFTASIEVLREVCETHNVTSLFYNYQYEFNERQRDVAVEQA
LTDVTCQGFDDSVMLAPGSVMTGNHDMYKVFTPFKNAFLRRLGEDLPECVNPPKVRPAGA
LTGKLAPIELNYPQQSFDTTWFAADENSAQVRLRHFCQYDVASYDTQRDFPAVDGTSRLS
ASLALGALSPRQCLHALLKAHPDALEGKTGAVWLSELIWREFYRHLITYHPNLCKHRPFI
DWTDNVQWNNDSAALTAWQQGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLVKDLLID
WRQGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKQGVFIRQW
LPELTDVPTTAIHTPWIWADKAQRTIDYPRPIVDHKLARNQTLAAYEAARKKN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcatttgatgtggtttcgcgcagatttgcgtgtgcatgataatctggctttg
gctgccgcctgtcgttccgacgacacggaggtactggcactgtttattgccccgctaaag
caatggcagcaacatgatatggcacctcgtcaggcggcatttttacaaagtcagcttaat
gccctacaacaggcactggcggagaggggaattcctcttctggttaagcaggtggatgac
ttcaccgccagcatagaggtgttacgcgaagtgtgtgaaacccataatgtcacatcgctg
ttttataactatcagtatgaatttaacgagcgtcagcgtgatgttgctgtggagcaggcg
ctgactgatgttacctgtcagggctttgatgatagtgtgatgctggcaccgggtagtgtg
atgaccggcaatcatgacatgtataaggtattcacaccgtttaaaaatgcctttttacgc
cgattgggtgaagatctaccggaatgcgtgaatccacccaaggtgcgtccggccggtgcg
ctgaccggcaagttagcacccattgagctaaattacccgcagcaatcgtttgataccact
tggtttgctgccgatgagaacagtgcacaggtccggttgcggcatttttgccaatacgat
gtggcgagttacgacacgcagcgcgactttcctgctgttgatggcaccagtcgactttct
gccagtctggcgctgggggcactgtcgccgcgccagtgtctgcacgctttattgaaagct
caccccgatgcactggaaggaaaaaccggggcagtctggctgagtgaactgatctggcgt
gagttttaccgtcatctgataacttaccatccaaacttatgtaaacaccgtccttttatc
gactggaccgataacgtgcagtggaataacgatagcgctgcgctgacggcctggcagcag
ggaaagaccggttatcccatcgttgatgcggcgatgcgtcaattgaatcaaaccggctgg
atgcataaccgattacgaatgattgtcgccagttttttggtaaaggatctgttgatcgac
tggcggcaaggtgaacgctatttcatgtctcaacttattgatggcgatctggcggcaaat
aacggcggctggcagtgggcagcatctaccggcaccgatgcggcaccctattttcgtatc
tttaatcccactactcagggggaacggtttgataaacagggggtgtttatccgtcaatgg
ctgcctgaattgacggatgttccgacaacagcgatacatacgccatggatatgggcagat
aaggcgcagcgaaccattgattatccgcgtccgatagttgatcacaaactggcgcggaac
caaactctggcggcttatgaagcggcaagaaagaaaaattaa
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