Limnobaculum zhutongyuii: EKN56_16960
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Entry
EKN56_16960 CDS
T06157
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00521
Streptomycin biosynthesis
prag00523
Polyketide sugar unit biosynthesis
prag00541
Biosynthesis of various nucleotide sugars
prag01100
Metabolic pathways
prag01110
Biosynthesis of secondary metabolites
prag01250
Biosynthesis of nucleotide sugars
Module
prag_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EKN56_16960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EKN56_16960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EKN56_16960 (rfbC)
Enzymes [BR:
prag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EKN56_16960 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QBH97932
UniProt:
A0A411WP09
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All DBs
Position
complement(3798491..3799045)
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AA seq
184 aa
AA seq
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MKVIETKLQGCLIIHPDVHGDNRGFFLETYQEERYAEYGIKYKFVQDNRSRSSFGVLRGL
HFQKTRPQGKLVSITRGEVFDVAVDLRPESKTFGEYVGVVLSEENNTQLFVPPGFAHGFC
VLSELADFSYKCTDYYSPSDEGGIIWNDPIINIEWPIKDPNLSEKDRLLPTFDDVKCNIL
GEKK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattgaaactaaattacaaggatgtctaattattcaccctgatgttcatggt
gataatcgaggttttttccttgaaacatatcaagaagaaagatatgcagagtatggtatt
aaatacaaatttgtacaagataatcgttcgcgctcatcatttggtgtgttaagaggatta
cactttcaaaaaacaaggccacaaggaaaattagtttctattactcgaggagaggttttt
gatgttgccgttgatttaagaccagaatcgaaaacttttggtgaatatgtaggggttgta
ctatcagaagagaataatacgcagctttttgttcctcccggttttgctcatggtttttgt
gtgctatctgaattagctgatttctcttataaatgcactgattattattctccttcagat
gaaggcggtataatatggaatgatcctataattaatattgagtggccgataaaagatcct
aatttatcagaaaaagatagattacttcctacttttgatgatgttaaatgtaacattttg
ggtgagaagaaatga
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