Limnobaculum zhutongyuii: EKN56_17890
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Entry
EKN56_17890 CDS
T06157
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00730
Thiamine metabolism
prag01100
Metabolic pathways
prag01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EKN56_17890 (thiC)
Enzymes [BR:
prag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EKN56_17890 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-ProteinID:
QBH98095
UniProt:
A0A411WQ16
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All DBs
Position
4008108..4010042
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AA seq
644 aa
AA seq
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MSNRRTQRAQAQQFIDQLQGSAFPDSKRIYLQGSQADLRVPMREIQLSPTLIGGSKEEPE
YQDNEPVPVYDTSGPYGDPQATLDVRQGLPALRKNWIEQRGDSEPLPQVSSHFIQKRLAD
EGLDHLRYTHLPAPRKAKPGKRVTQLHYARAGIVTPEMEFIAIRENMGRERIRTDVLKQQ
HPGQNFGAVLPDNITPEFVRDEVAAGRAIIPLNINHPESEPMIIGRNFLVKVNANIGNSA
LTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVN
GIAENLNWEVFKDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCL
SHHQENFLYLHFREICELCSQYDVALSLGDGLRPGSIQDANDEAQFAELKTLGELTKIAW
EYDVQVMIEGPGHIPMHMIRQNMTLELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAL
IGWFGCAMLCYVTPKEHLGLPNKDDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKAR
FEFRWEDQFNLALDPETARAYHDETLPQASGKVAHFCSMCGPKFCSMKISQEVRDFAKDQ
AQQNLLSVQASGMNEMSENFRAQGSELYHPAASDTAITEKNAHG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccgaagaacccaacgcgctcaggcgcagcaatttattgaccagctacaggga
agcgcctttcccgattctaaacgtatctatctacaaggttcacaagcggatttgcgcgtg
cctatgcgtgaaattcagctatcacccacgctgattggcggtagcaaagaggagcctgaa
tatcaggataatgaaccggtaccggtttatgatacttccggcccttatggcgaccctcaa
gcaacgctggatgttcgacaagggttacctgctttgcgaaaaaattggatcgaacaacgt
ggtgattctgagcctttgccccaggtcagttcacactttatccaaaagagattggccgac
gaaggtttagaccacctgcgttacacccatcttcccgcccctcgcaaagcgaagcccggc
aaacgagttacccagttacattacgccagagcggggatcgtaacgccggaaatggagttt
attgccatccgagaaaatatgggacgggaacgtattcgtaccgatgtattaaaacagcaa
catcccggacaaaactttggagccgtattgccggacaatatcactcccgaatttgttcgt
gatgaagtggcggctggcagggcgattattcctctgaatatcaaccatccggaatcagaa
ccgatgatcatcggtcgaaactttctggtgaaagtgaatgctaacattggtaactcagcg
ttaacttcatcgattgaagaagaagtagaaaaactggtttggtctacccgctggggagcg
gatacggtaatggacctttctaccggacgctatattcatgaaactcgtgaatggattatc
cgcaatagcccagttcctattggtaccgtacccatttatcaggcgctggaaaaagtaaac
ggtatagctgaaaacctcaactgggaagtatttaaagacacgctaatagaacaagcagag
caaggcgtcgactacttcactatccatgccggtgtgctgctacgctacgtgccaatgacg
gccaatcgcctgacgggcattgtttcccggggcggttccattatggcgaaatggtgtctg
tctcaccatcaggagaactttctctatctgcattttcgtgaaatttgtgaattatgcagc
cagtacgatgttgctctttcactgggtgacggcctgcgccccggctctattcaggacgcc
aatgatgaagctcagtttgcagaactgaaaacgctgggtgaactcactaaaatcgcctgg
gagtatgatgttcaggtgatgattgaaggaccaggccatattcctatgcatatgatccgc
cagaatatgacccttgaactggagcactgtcatgaagcacccttttatactttagggccg
ctaaccaccgatatcgccccgggatatgaccattttacctctggcattggtgccgctctg
ataggctggtttggctgcgccatgctttgctacgtcactcccaaagaacaccttggtctg
cctaataaagacgacgtaaagcaagggcttattacctataaaattgctgctcatgctgcc
gatctggcgaaaggccaccctggcgcacaaattcgtgacaatgctatgtcaaaagctcgc
tttgaattccgctgggaagatcagtttaatctggccctcgatccggaaaccgcccgagcc
tatcacgatgaaaccttaccgcaagcctccggcaaagttgcccacttctgctcaatgtgc
gggccgaagttctgttcaatgaaaatttctcaggaagtacgggatttcgccaaagatcag
gcacaacaaaatttactgtcagtgcaagccagcggaatgaacgaaatgtcagaaaatttc
cgcgctcagggcagcgaactttatcaccctgccgcatcagatactgcaataacggagaaa
aacgctcatggctga
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