Limnobaculum zhutongyuii: EKN56_18445
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Entry
EKN56_18445 CDS
T06157
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKN56_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prag03021
]
EKN56_18445
03400 DNA repair and recombination proteins [BR:
prag03400
]
EKN56_18445
Enzymes [BR:
prag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EKN56_18445
Transcription machinery [BR:
prag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EKN56_18445
DNA repair and recombination proteins [BR:
prag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EKN56_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QBH98189
UniProt:
A0A411WPL5
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All DBs
Position
complement(4135115..4136104)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVHGKDEVILSLNKSGIGPVTAADITHDGD
VEVVKPQHLICHLTDENASISMRIKVQRGRGYVPASARIHTEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEESIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccacgcctggtagatatcgagcaagtgagt
tcgacgcacgctaaggtgacccttgagccgttagagcgtggcttcggccatactttaggt
aacgcactgcgccgcattctgctttcatcaatgccgggttgtgcggtaactgaagttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgtacaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgaaagttcatggtaaagatgaagttattctt
agcttgaataagtctggcattggccctgtgactgcagccgacattacccatgatggggat
gttgaagtcgtcaaacctcagcacttgatctgccatctgactgatgagaacgcatctatt
agtatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgtattcat
acggaagaagatgagcgtccaattggtcgtctgttggttgacgcatgctacagcccggta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtactgacttggataag
ctggtcatcgagatggaaactaacggtacgattgatccggaagaatcaattcgccgtgca
gcaaccatcctggctgaacaacttgaagctttcgttgacttacgtgatgtacgtcagcca
gaagttaaagaagagaagccagagttcgatccgatcttgctacgccctgttgacgatctg
gaactgactgtccgctccgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaagttgagttgttaaaaactcctaacttgggtaaaaaatctctt
actgagattaaagacgtgcttgcatctcgtggtttgtctctgggcatgcgcctggaaaac
tggccaccagctagcattgctgacgagtaa
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