Pieris rapae (cabbage white): 110991267
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Entry
110991267 CDS
T05162
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
110991267
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110991267
Complex C
U4/U6.U5 tri-SnRNP related factors
110991267
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
DUF2379
Cnd1
Motif
Other DBs
NCBI-GeneID:
110991267
NCBI-ProteinID:
XP_022112269
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Position
10:complement(5988437..5992529)
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AA seq
1008 aa
AA seq
DB search
MEDSHERKRRKEKSDEYYKGRKSRKHSSKSPERHRDHGRDSVRDASRKRRRSRSPKRDER
RNEDKIEAPPRKSKTDDMLNTRTGGAYIPPARLRMMQAQITDKSSVAYQRLAWEALKKSI
HGHINKINVGNIGIIIKELLKENIVRGRGLLCRSVIQAQAASPTFTNVYAALVAAVNSRF
PNIGELLLKRLVIQFKRGFKRNDKAICISSVSFVAHLVNQRVAHEILALELLTLLVETPS
DDSVEVAIAFLKECGQKLTEVSSKGVNAIFEMLRNILHEGQLDKRVQYMIEVMFQVWKDG
FKDHPSVIEELELVPEEEQFTHLLMLDEATDAQDILNVFKFDEKYEDNEQKYKTLSKEIL
GSDAESGEEEDGSAESGSDESDDEEDEQKPVTIIDNTETNLVALRRTIYLTINSSLDFEE
CAHKLMKMQLKPGQEIELCHMFLDCCAEQRTYEKFYGLLAQRFCNINRIYIGPFEEIFKD
SYATAHRLDTNRLRNISKFFAHLLFTDSISWEALECVKLNEEDTTSSSRIYIKILFQELA
EYMGLKKLNDRLRDQTLQEAFLGIFPRDNPKNTRFSINFFTSIGLGGLTDDLREHLKQMP
KNVAVPAEIKVNSDSSSDSSSSSSSSSSSSSDSSSSDSEEDTGNGKNKTEGKGGNSSKSP
KDNPAKNSNKGERWGHDGYFERYGRDEESDRHGRSKRGEFARPNDVSKHTKDTQRSSDDI
DIRRKNALAKGKGKNTQQKRKEYANKKEMNDFDVRNRDESGQAVKEQTPTYDSYWNSTIR
KKRNDTSNDQDDKYRRRNKNSRSNKALDRDNYKESVERSENEQNLNSSKDKYERRNDQKS
IGNNSNNEQREFDVGNIKSNSKKDSQYQGRHHENSSHNTSRPEKSHQDISGKGFHIEKGK
TDKNKSYKKHYKHNRDVQQNQNKESSDDSEDDSSNEKHNSKPTGDSDDSKSGRTPEHDSD
SRNRRDKYSHEKENGEPKSGRYWDNYDTGKSRDSQRQSRHKREIKSRR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcccacgagcgcaaacgtagaaaggaaaaatcagacgagtattacaaagga
agaaaatctagaaaacatagttctaaatcccccgagagacaccgtgatcatggtagagat
tctgtaagagatgccagccgcaaaagaagacgttcacgatccccaaaaagagatgaaaga
cgcaatgaggataaaattgaagctcctcctagaaaatcaaaaacagatgatatgctgaat
actaggactggaggtgcctatattccacccgcacgtctcaggatgatgcaagctcaaatc
acagataaatcttctgttgcttatcagaggttagcttgggaagctctgaaaaaatctatt
cacggtcatataaacaaaattaatgttggcaatattggtataattatcaaagaactactt
aaagaaaacattgtccgtggtcgtggtttgttgtgtcgttcagttattcaagctcaggct
gcatcaccaacatttactaatgtgtatgcagccctcgttgctgctgtaaattctcgattt
cctaacattggggaactattactaaagagattagtaatacaatttaaacggggctttaaa
aggaatgacaaggcaatatgcatatcatcagtttcttttgtagcccatcttgttaatcag
agggttgcacatgaaattcttgctttggagcttttaacacttcttgttgagactccgtct
gatgattctgtggaagttgcaatagcatttttaaaggaatgtggacagaagttaacggaa
gtctcatctaagggtgttaatgctatttttgagatgttaagaaatatattacatgaaggt
caattggataaaagggtacagtacatgatagaagtaatgtttcaagtttggaaagatgga
tttaaggatcacccctcagttattgaagaactagaattagtacctgaggaagaacaattt
actcatctattaatgctggatgaagctacagatgctcaggatatcctaaatgtttttaaa
tttgatgagaaatatgaagacaatgaacagaaatataagacattgagtaaagaaattctt
ggttcggatgctgaatctggtgaagaagaggatgggtcagcagaatctggcagcgatgaa
agtgatgacgaggaagatgaacaaaagccagttacaattatagacaatacagaaacaaat
cttgttgcacttagacgcactatctatttaactattaattcaagtttggacttcgaggaa
tgtgcacataaactcatgaaaatgcaacttaaacctggacaagaaattgaactgtgtcat
atgtttctggactgttgtgctgaacagagaacatatgaaaaattttatggtctactagca
caaagattttgtaatatcaatagaatatatattggcccatttgaagagatattcaaagat
tcgtatgcaacagctcacagattagataccaatcgtctcagaaatattagcaagtttttt
gctcatctcctattcacagattcaattagctgggaagcgttagaatgtgtgaaacttaat
gaagaagatactacaagttcaagtcgtatttatataaaaattctgtttcaagaacttgcc
gagtatatggggctaaagaagcttaatgaccggctgagagatcagacacttcaggaagct
ttcttaggaatatttcctagagacaatccaaagaataccagattttccataaactttttt
acctctattggtttaggaggtcttacagatgacttaagagaacatcttaagcaaatgccc
aagaatgtagcagtcccagcagaaatcaaggttaatagtgactcaagttctgactccagt
tcaagctcttcatcatcttcatcatcttctagtgattccagctcaagtgattcagaagaa
gatacaggaaatggtaaaaataaaactgaaggaaaaggtggtaattcttcaaaatctcct
aaagataatccagccaaaaatagtaataaaggagaaagatggggtcatgatggttatttt
gaaagatatggaagagatgaagaaagtgacagacatggtagatcaaagcgaggcgaattt
gcaaggcctaatgatgtttcgaaacatactaaggatacacagagaagtagtgatgatatt
gacattagacgaaagaatgccttggcaaagggcaaaggcaaaaacacacaacaaaaaaga
aaggaatatgcaaacaaaaaagaaatgaatgattttgatgtaaggaacagagatgaaagt
ggacaagcagtaaaagaacaaacccccacttatgattcatattggaatagcactataaga
aagaaaagaaatgatactagtaatgatcaagatgataaatatagacgcagaaataaaaat
agtagaagtaacaaagctttagatagggacaattataaagaatctgttgagagaagtgag
aatgagcaaaacttaaacagcagtaaagataagtatgaaagaagaaatgaccagaaatcc
attggaaacaacagcaataatgagcaaagagaatttgatgttggtaatataaaaagcaac
agtaaaaaagacagtcaatatcaaggaaggcaccatgaaaacagttcacacaatacaagt
agaccagaaaaaagccatcaagacatttcaggtaaaggattccacatagagaagggtaaa
acagacaaaaataagtcttataaaaagcattacaaacataatagggatgtccaacagaat
cagaataaagaaagtagtgatgattcagaggatgattctagtaatgaaaaacataattca
aaacccacgggagattcagatgacagtaagagtggcagaacacctgaacatgattctgat
tcaagaaatagaagagataaatattcacatgaaaaagaaaatggtgaacccaaaagtgga
agatattgggacaattatgacacaggaaagtcaagagatagccagagacaatcaagacac
aaaagggaaataaagagtagacggtga
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